Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000219 (fabZ) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000219 showshow history
Names
fabZ ECDH10B_0160
Product
(3R)-hydroxymyristol acyl carrier protein dehydratase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 176205 176660 456 152
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR013114 (IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ) Jul 2009
Automated Process Approved IPR010084 (IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006633 fatty acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010084
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010084
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016836 hydro-lyase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010084
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fabZ Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000613
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0160 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product (3R)-hydroxymyristol acyl carrier protein dehydratase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ Protein Sequence Similarity - InterPro Domain: IPR013114
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Protein Sequence Similarity - InterPro Domain: IPR010084
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0000613 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000613
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006633 fatty acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010084
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010084
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016836 hydro-lyase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010084
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000507 fabZ CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000462 fabZ CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017468 fabZ CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0000941 fabZ CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000670 fabZ CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009285 fabZ CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000189 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006337 fabZ CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000175 fabZ CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009541 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007901 fabZ CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007284 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076282 fabZ CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005832 fabZ CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006849 fabZ CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000191 fabZ CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004633 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002478 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009433 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0007939 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008622 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010279 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005030 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010286 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008759 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009363 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009556 fabZ CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024096 fabZ CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007875 fabZ CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0004865 fabZ CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0000613 fabZ CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000180 fabZ CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000180 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000192 fabZ CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130061 fabZ CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001611 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000196 fabZ CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061285 fabZ CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000564 fabZ CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001484 fabZ CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001679 fabZ CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004447 fabZ CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002918 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000255 fabZ CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004527 fabZ CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0000822 fabZ CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0000792 fabZ CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008940 fabZ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004631 fabZ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0008568 fabZ CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004581 fabZ CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005077 fabZ CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008689 fabZ CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004622 fabZ CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0005808 fabZ CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000237 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000235 fabZ CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000295 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0004921 fabZ CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008421 fabZ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004346 fabZ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004491 fabZ CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0105815 fabZ CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0081939 fabZ CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0091313 fabZ CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0004255 fabZ CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009230 fabZ CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004541 fabZ CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000178 fabZ CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005571 fabZ CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007959 fabZ CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000212 fabZ CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071111 fabZ CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086531 fabZ CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000167 fabZ CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000206 fabZ CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002078 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0009467 fabZ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003463 fabZ CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002433 fabZ CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000507 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0241057 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007545 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000651 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005106 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002305 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0118732 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008400 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007336 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001156 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009264 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006400 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032883 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005595 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003544 fabZ CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001984 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006052 fabZ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0004977 fabZ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003094 fabZ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003719 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001260 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 171205 to 181660
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000215rsePCDSforward170650172002Upstream
AEC-0000216bamACDSforward172032174464Upstream
AEC-0000217skpCDSforward174586175071Upstream
AEC-0000218lpxDCDSforward175075176100Upstream
AEC-0000219fabZCDSforward176205176660Matches
AEC-0000220lpxACDSforward176664177452Downstream
AEC-0000221lpxBCDSforward177452178600Downstream
AEC-0000222rnhBCDSforward178597179193Downstream
AEC-0000223dnaECDSforward179230182712Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948