Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000272 (proA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000272 showshow history
Names
proA ECDH10B_0225
Product
gamma-glutamylphosphate reductase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 234831 236084 1254 418
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR016161 (IPR016161 Aldehyde/histidinol dehydrogenase) Jul 2009
Automated Process Approved IPR015590 (IPR015590 Aldehyde dehydrogenase domain) Jul 2009
Automated Process Approved IPR016162 (IPR016162 Aldehyde dehydrogenase, N-terminal) Jul 2009
Automated Process Approved IPR016163 (IPR016163 Aldehyde dehydrogenase, C-terminal) Jul 2009
Automated Process Approved IPR012134 (IPR012134 Glutamate-5-semialdehyde dehydrogenase) Jul 2009
Automated Process Approved IPR000965 (IPR000965 GPR domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006561 proline biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012134
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012134
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004350 glutamate-5-semialdehyde dehydrogenase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012134
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name proA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000832
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0225 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product gamma-glutamylphosphate reductase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR015590 Aldehyde dehydrogenase domain Protein Sequence Similarity - InterPro Domain: IPR015590
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016162 Aldehyde dehydrogenase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR016162
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000965 GPR domain Protein Sequence Similarity - InterPro Domain: IPR000965
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012134 Glutamate-5-semialdehyde dehydrogenase Protein Sequence Similarity - InterPro Domain: IPR012134
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016163 Aldehyde dehydrogenase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR016163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016161 Aldehyde/histidinol dehydrogenase Protein Sequence Similarity - InterPro Domain: IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0000832 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0000832
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006561 proline biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012134
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004350 glutamate-5-semialdehyde dehydrogenase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012134
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012134
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000756 proA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000864 proA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016032 proA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002677 proA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000588 proA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007411 proA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000276 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006202 proA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000258 proA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009356 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007115 proA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005830 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076464 proA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007090 proA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006757 proA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000249 proA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004726 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000088 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009530 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008035 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009530 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008338 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005127 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008710 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0008856 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009191 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009462 proA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009053 proA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008034 proA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009978 proA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024191 proA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006397 proA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0004953 proA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0000832 proA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000245 proA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000271 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000296 proA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130158 proA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003221 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000285 proA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063771 proA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001993 proA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000888 proA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002561 proA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004535 proA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002825 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000375 proA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004632 proA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0001047 proA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0001035 proA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005821 proA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004730 proA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004084 proA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004644 proA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006682 proA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008800 proA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004734 proA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006868 proA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002460 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002433 proA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003292 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005022 proA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008173 proA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004462 proA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007766 proA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106015 proA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084243 proA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0091574 proA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0009180 proA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005518 proA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007507 proA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000270 proA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005636 proA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005051 proA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000529 proA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071265 proA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086653 proA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000297 proA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000303 proA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002633 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0009269 proA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001921 proA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001831 proA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000801 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235820 proA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007422 proA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003255 proA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006993 proA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000312 proA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126146 proA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007429 proA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006796 proA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001545 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005182 proA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004436 proA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030619 proA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007539 proA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001065 proA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003418 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005081 proA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007156 proA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000957 proA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001120 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003898 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 229831 to 241084
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000267gptCDSforward230081230539Upstream
AEC-0000268frsACDSforward230631231875Upstream
AEC-0000269crlCDSforward231933232334Upstream
AEC-0000270phoECDScomplement232373233428Upstream
AEC-0000271proBCDSforward233716234819Upstream
AEC-0000272proACDSforward234831236084Matches
AEC-0004114thrWtRNAforward236199236274Downstream
AEC-0004554CP4-6prophageforward236286272039Downstream
AEC-0000273ykfICDScomplement236656236997Downstream
AEC-0000274yafWCDScomplement237018237335Downstream
AEC-0004048ykfHCDScomplement237354237575Downstream
AEC-0000275ykfGCDScomplement237584238060Downstream
AEC-0000276yafXCDScomplement238076238534Downstream
AEC-0000277ykfFCDScomplement238632238871Downstream
AEC-0000278ykfBCDScomplement238948239415Downstream
AEC-0000279yafYCDScomplement239438239881Downstream
AEC-0004413ykfLpseudogenecomplement239881240102Downstream
AEC-0004414ykfKpseudogenecomplement240104240295Downstream
AEC-0000280yafZCDScomplement240512241333Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948