Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000367 (tauB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000367 showshow history
Names
tauB ECDH10B_0322
Product
taurine transporter subunit; ATP-binding component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 324762 325529 768 256
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Jul 2009
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name tauB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001259
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0322 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product taurine transporter subunit; ATP-binding component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0001259 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001259
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002391 tauB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002232 tauB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017140 tauB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003292 tauB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000546 tauB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008188 tauB CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000433 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006149 tauB CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000347 tauB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009265 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008443 tauB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006884 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076547 tauB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007029 tauB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008995 tauB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000325 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002403 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010613 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008195 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009742 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007928 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005280 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008924 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009011 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008828 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007730 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007151 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007957 tauB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006504 tauB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024356 tauB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008653 tauB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005112 tauB CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0001259 tauB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000369 tauB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000397 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000394 tauB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130311 tauB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005040 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000386 tauB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061783 tauB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000872 tauB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003736 tauB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001801 tauB CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000284 tauB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005675 tauB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005023 tauB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000565 tauB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071218 tauB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086614 tauB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000345 tauB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000373 tauB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001470 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0011379 ssiB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001071 tauB CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001941 tauB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001009 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234644 tauB1 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007817 tauB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003927 tauB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007355 tauB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0003120 tauB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0115922 tauB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006903 tauB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008239 tauB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001591 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009454 tauB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006842 tauB CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0033760 tauB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0004951 tauB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0004655 tauB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000128 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004449 tauB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007973 tauB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003839 tauB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004653 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000310 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 319762 to 330529
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004417yaiXpseudogenecomplement319399319808(Interval #2) Upstream
AEC-0000011IS2.1repeat_regionforward319815321145Upstream
AEC-0000361insC-1CDSforward319861320271Upstream
AEC-0000362insD-1CDSforward320229321134Upstream
AEC-0000363yaiX_1CDSpcomplement321059321427Upstream
AEC-0004417yaiXpseudogenecomplement321145321427(Interval #1) Upstream
AEC-0000364yaiPCDScomplement321294322490Upstream
AEC-0000365yaiSpseudogenecomplement322500323171Upstream
AEC-0004534yaiS_1CDSpcomplement322614323171Upstream
AEC-0000366tauACDSforward323787324749Upstream
AEC-0000367tauBCDSforward324762325529Matches
AEC-0000368tauCCDSforward325526326353Overlaps Downstream
AEC-0000369tauDCDSforward326350327201Downstream
AEC-0000370hemBCDScomplement327308328282Downstream
AEC-0000372yaiT_1CDSpforward328806330266Downstream
AEC-0004419yaiTpseudogeneforward328806330263(Interval #1) Downstream
AEC-0000012IS3.2repeat_regioncomplement330264331521Downstream
AEC-0000373insF-2CDScomplement330294331160Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948