Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000417 (thiL) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000417 showshow history
Names
thiL ECDH10B_0373
Product
thiamin-monophosphate kinase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 374189 375166 978 326
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006283 (IPR006283 Thiamine-monophosphate kinase) Jul 2009
Automated Process Approved IPR000728 (IPR000728 (DEPRECATED) AIR synthase related protein, N-terminal domain) Jul 2009
Automated Process Approved IPR010918 (IPR010918 PurM-like, C-terminal domain) Jul 2009
Automated Process Approved IPR016188 (IPR016188 PurM-like, N-terminal domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009228 thiamine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006283
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000728
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009030 thiamine-phosphate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006283
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name thiL Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001452
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0373 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product thiamin-monophosphate kinase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000728 (DEPRECATED) AIR synthase related protein, N-terminal domain Protein Sequence Similarity - InterPro Domain: IPR000728
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006283 Thiamine-monophosphate kinase Protein Sequence Similarity - InterPro Domain: IPR006283
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010918 PurM-like, C-terminal domain Protein Sequence Similarity - InterPro Domain: IPR010918
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016188 PurM-like, N-terminal domain Protein Sequence Similarity - InterPro Domain: IPR016188
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0001452 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001452
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009228 thiamine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006283
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009030 thiamine-phosphate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006283
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000728
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000393 thiL CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000394 thiL CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017566 thiL CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002613 thiL CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000496 thiL CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008136 thiL CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000480 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006094 thiL CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000392 thiL CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009206 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008494 thiL CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006934 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076602 thiL CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006978 thiL CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009047 thiL CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000371 thiL CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004898 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002346 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010669 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008251 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009800 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007985 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005338 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008869 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009067 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008886 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007787 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007209 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008013 thiL CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006558 thiL CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024411 thiL CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008701 thiL CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005169 thiL CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0001452 thiL CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000419 thiL CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000448 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000452 thiL CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130361 thiL CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005099 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000441 thiL CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061374 thiL CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000617 thiL CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001511 thiL CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002045 thiL CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004636 thiL CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002636 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000532 thiL CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004736 thiL CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0001346 thiL CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0001319 thiL CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005717 thiL CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004887 thiL CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004242 thiL CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004746 thiL CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006786 thiL CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008905 thiL CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004836 thiL CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006975 thiL CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002321 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002304 thiL CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003178 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005126 thiL CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006987 thiL CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004569 thiL CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006788 thiL CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106169 thiL CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084159 thiL CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0091864 thiL CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0009072 thiL CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005412 thiL CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006510 thiL CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000338 thiL CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005734 thiL CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004966 thiL CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000349 thiL CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071324 thiL CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086714 thiL CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000399 thiL CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000425 thiL CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002860 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0009152 thiL CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001881 thiL CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000886 thiL CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000834 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235915 thiL CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007286 thiL CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003210 thiL CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006954 thiL CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000350 thiL CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126023 thiL CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007472 thiL CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006857 thiL CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003093 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005139 thiL CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004477 thiL CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030656 thiL CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007581 thiL CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001107 thiL CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003377 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005125 thiL CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007121 thiL CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000989 thiL CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001156 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003861 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 369189 to 380166
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000410yajDCDSforward369160369507Upstream
AEC-0000411tsxCDScomplement369684370568Upstream
AEC-0000412yajICDScomplement370867371406Upstream
AEC-0000413nrdRCDSforward371557372006Upstream
AEC-0000414ribDCDSforward372010373113Upstream
AEC-0000415ribECDSforward373202373672Upstream
AEC-0000416nusBCDSforward373692374111Upstream
AEC-0000417thiLCDSforward374189375166Matches
AEC-0000418pgpACDSforward375144375662Overlaps Downstream
AEC-0000419yajOCDScomplement375716376690Downstream
AEC-0000420dxsCDScomplement376870378732Downstream
AEC-0000421ispACDScomplement378757379656Downstream
AEC-0000422xseBCDScomplement379656379898Downstream
AEC-0000423thiICDSforward380104381552Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948