Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000425 (panE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000425 showshow history
Names
panE ECDH10B_0381
Product
2-dehydropantoate reductase, NADPH-specific
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 382159 383070 912 304
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003710 (IPR003710 Ketopantoate reductase ApbA/PanE) Jul 2009
Automated Process Approved IPR013332 (IPR013332 Ketopantoate reductase, N-terminal domain) Jul 2009
Automated Process Approved IPR013752 (IPR013752 Ketopantoate reductase, C-terminal domain) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR013328 (IPR013328 6-phosphogluconate dehydrogenase, domain 2) Jul 2009
Automated Process Approved IPR008927 (IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015940 pantothenate biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003710
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003710
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050662 (OBSOLETE) coenzyme binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013328
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003710
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013752
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name panE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001474
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0381 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product 2-dehydropantoate reductase, NADPH-specific Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013332 Ketopantoate reductase, N-terminal domain Protein Sequence Similarity - InterPro Domain: IPR013332
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003710 Ketopantoate reductase ApbA/PanE Protein Sequence Similarity - InterPro Domain: IPR003710
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013752 Ketopantoate reductase, C-terminal domain Protein Sequence Similarity - InterPro Domain: IPR013752
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily Protein Sequence Similarity - InterPro Domain: IPR008927
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013328 6-phosphogluconate dehydrogenase, domain 2 Protein Sequence Similarity - InterPro Domain: IPR013328
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0001474 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001474
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015940 pantothenate biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003710
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003710
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003710
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050661 NADP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013752
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0050662 (OBSOLETE) coenzyme binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013328
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000733 panE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001091 panE CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017577 panE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002606 panE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000487 panE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008128 panE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000489 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006086 panE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000399 apbA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009197 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008502 panE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006942 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076610 panE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006970 panE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009056 panE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000379 panE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004907 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002336 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010679 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008261 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009810 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007995 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005348 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008859 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009077 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008896 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007797 panE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007219 panE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008023 panE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006568 panE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024421 panE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008709 panE CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005178 panE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0001474 panE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000427 panE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000456 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000460 panE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130370 panE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005109 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000449 apbA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061381 panE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000632 panE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000276 panE CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002052 panE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004651 panE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002629 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000550 panE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004751 panE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0001394 apbA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0001367 apbA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005702 panE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004902 panE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004257 panE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004761 panE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0006801 panE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008920 panE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004851 panE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0006990 panE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002306 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002289 panE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003162 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005141 panE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006972 panE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004584 panE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006803 panE CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106202 panE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084144 panE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0091901 apbA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0009057 panE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005400 panE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006525 panE CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000346 apbA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005743 panE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004958 panE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000335 apbA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071333 panE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086722 panE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000407 apbA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000433 panE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002853 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0009132 apbA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001870 apbA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000879 panE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000841 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0235930 panE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007185 panE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003201 panE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006945 panE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000359 apbA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126002 panE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007481 panE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006866 panE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001843 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005130 panE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004486 panE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030670 panE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007590 panE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001116 panE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003368 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005134 panE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007113 panE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000997 panE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001164 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003854 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 377159 to 388070
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000420dxsCDScomplement376870378732Downstream
AEC-0000421ispACDScomplement378757379656Downstream
AEC-0000422xseBCDScomplement379656379898Downstream
AEC-0000423thiICDSforward380104381552Downstream
AEC-0000424yajLCDScomplement381606382196Overlaps Downstream
AEC-0000425panECDScomplement382159383070Matches
AEC-0000426yajQCDSforward383238383729Upstream
AEC-0000427yajRCDScomplement383857385221Upstream
AEC-0000428cyoECDScomplement385370386260Upstream
AEC-0000429cyoDCDScomplement386272386601Upstream
AEC-0000430cyoCCDScomplement386601387215Upstream
AEC-0000431cyoBCDScomplement387205389196Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948