Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000473 (hemH) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000473 showshow history
Names
hemH ECDH10B_0431
Product
ferrochelatase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 436610 437572 963 321
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001015 (IPR001015 Ferrochelatase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006783 heme biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001015
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004325 ferrochelatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001015
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name hemH Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001649
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0431 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product ferrochelatase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001015 Ferrochelatase Protein Sequence Similarity - InterPro Domain: IPR001015
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0001649 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001649
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006783 heme biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001015
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004325 ferrochelatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001015
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000401 hemH CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000351 hemH CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019511 hemH CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002547 hemH CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000431 hemH CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006618 hemH CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000540 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0006033 hemH CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000446 hemH CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009116 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008674 hemH CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007781 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076670 hemH CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006014 hemH CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007908 hemH CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000431 hemH CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0004963 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001568 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010737 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008319 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005583 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006028 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005406 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007182 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009138 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006529 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007855 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005970 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005792 hemH CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006627 hemH CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024472 hemH CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008885 hemH CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005234 hemH CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0001649 hemH CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000477 hemH CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000509 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000518 hemH CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130420 hemH CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005165 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000504 hemH CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061427 hemH CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000655 hemH CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000295 hemH CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002102 hemH CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004713 hemH CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002565 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000619 hemH CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004812 hemH CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0001586 hemH CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0001554 hemH CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005641 hemH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0004961 hemH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004318 hemH CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007779 hemH CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005938 hemH CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0008981 hemH CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004911 hemH CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007050 hemH CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002249 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002233 hemH CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003092 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005199 hemH CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006268 hemH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004641 hemH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008184 hemH CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106335 hemH CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084085 hemH CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092056 hemH CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008995 hemH CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005338 hemH CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004875 hemH CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000405 hemH CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005803 hemH CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005181 hemH CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000496 hemH CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071398 hemH CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086778 hemH CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000468 hemH CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000498 hemH CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002564 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008952 hemH CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001813 hemH CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000826 hemH CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001385 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236105 hemH CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007010 hemH CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003134 hemH CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006892 hemH CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000410 hemH CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125760 hemH CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007534 hemH CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007956 hemH CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002140 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005073 hemH CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004540 hemH CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030723 hemH CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008780 hemH CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001184 hemH CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003303 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005191 hemH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007059 hemH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001050 hemH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001229 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003788 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 431610 to 442572
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000468dnaXCDSforward430647432578Upstream
AEC-0000469ybaBCDSforward432631432960Upstream
AEC-0000470recRCDSforward432960433565Upstream
AEC-0000471htpGCDSforward433675435549Upstream
AEC-0000472adkCDSforward435730436374Upstream
AEC-0000473hemHCDSforward436610437572Matches
AEC-0000474aesCDScomplement437569438528Overlaps Downstream
AEC-0000475gskCDSforward438680439984Downstream
AEC-0000476ybaLCDScomplement440117441793Downstream
AEC-0000477fsrCDScomplement442031443251Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948