Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000511 (glxK) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000511 showshow history
Names
glxK ECDH10B_0470
Product
glycerate kinase II
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 480443 481588 1146 382
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004381 (IPR004381 Glycerate kinase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0031388 organic acid phosphorylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004381
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008887 glycerate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004381
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name glxK Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001773
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0470 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product glycerate kinase II Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004381 Glycerate kinase Protein Sequence Similarity - InterPro Domain: IPR004381
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0001773 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001773
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0031388 organic acid phosphorylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004381
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008887 glycerate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004381
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002899 glxK CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000031 glxK CDS
Ortholog
Automated Process Approved Go view Escherichia coli 101-1 (EAEC) BAB-0006578 CDS
Automated Process Approved Go view Escherichia coli 536 (UPEC) AEF-0000578 CDS
Automated Process Approved Go view Escherichia coli 53638 (EIEC) ADP-0005994 CDS
Automated Process Approved Go view Escherichia coli APEC O1 (APEC) AEG-0000485 glxK CDS
Automated Process Approved Go view Escherichia coli ATCC 8739 AEM-0009080 CDS
Automated Process Approved Go view Escherichia coli B171 (EPEC) ADN-0009338 CDS
Automated Process Approved Go view Escherichia coli B7A (ETEC) ADK-0008485 CDS
Automated Process Approved Go view Escherichia coli CFT073 (UPEC) ABR-0076703 glxK CDS
Automated Process Approved Go view Escherichia coli E110019 (EPEC) ADM-0005977 CDS
Automated Process Approved Go view Escherichia coli E22 (EPEC) ADL-0007871 CDS
Automated Process Approved Go view Escherichia coli E2348/69 (EPEC) BCI-0000469 glxK CDS
Automated Process Approved Go view Escherichia coli E24377A (ETEC) ADO-0005000 CDS
Automated Process Approved Go view Escherichia coli EC4024 (EHEC) BBI-0001621 CDS
Automated Process Approved Go view Escherichia coli EC4042 (EHEC) BBA-0010787 CDS
Automated Process Approved Go view Escherichia coli EC4045 (EHEC) BBB-0008369 CDS
Automated Process Approved Go view Escherichia coli EC4076 (EHEC) BAZ-0005632 CDS
Automated Process Approved Go view Escherichia coli EC4113 (EHEC) BAY-0005979 CDS
Automated Process Approved Go view Escherichia coli EC4115 (EHEC) BAS-0005455 CDS
Automated Process Approved Go view Escherichia coli EC4196 (EHEC) BAX-0007232 CDS
Automated Process Approved Go view Escherichia coli EC4206 (EHEC) BAW-0009188 CDS
Automated Process Approved Go view Escherichia coli EC4401 (EHEC) BAV-0006579 CDS
Automated Process Approved Go view Escherichia coli EC4486 (EHEC) BAU-0007907 CDS
Automated Process Approved Go view Escherichia coli EC4501 (EHEC) BAT-0005921 CDS
Automated Process Approved Go view Escherichia coli EC508 (EHEC) BBJ-0005840 CDS
Automated Process Approved Go view Escherichia coli EC869 (EHEC) BBC-0006677 CDS
Automated Process Approved Go view Escherichia coli EDL933 (EHEC) ABH-0024521 glxK CDS
Automated Process Approved Go view Escherichia coli F11 (UPEC) ADQ-0007346 glxK CDS
Automated Process Approved Go view Escherichia coli HS ADR-0005269 CDS
Person Approved Go view Escherichia coli K-12 MG1655 ABE-0001773 glxK CDS
Automated Process Approved Go view Escherichia coli K-12 W3110 ADY-0000515 glxK CDS
Automated Process Approved Go view Escherichia coli SE11 AFS-0000548 CDS
Automated Process Approved Go view Escherichia coli SMS-3-5 AFT-0000558 CDS
Automated Process Approved Go view Escherichia coli Sakai (EHEC) ACA-0130468 glxK CDS
Automated Process Approved Go view Escherichia coli TW14588 (EHEC) BBK-0005214 CDS
Automated Process Approved Go view Escherichia coli UTI89 (UPEC) AEA-0000543 ybbZ CDS
Automated Process Approved Go view Salmonella Agona SL483 BBX-0004749 CDS
Automated Process Approved Go view Salmonella Choleraesuis SC-B67 ADB-0000656 glxK CDS
Automated Process Approved Go view Salmonella Dublin CT_02021853 BCB-0004849 CDS
Automated Process Approved Go view Salmonella Enteritidis P125109 BCF-0001716 glxK CDS
Automated Process Approved Go view Salmonella Gallinarum 287/91 BCG-0001673 glxK CDS
Automated Process Approved Go view Salmonella Hadar RI_05P066 BBT-0005603 CDS
Automated Process Approved Go view Salmonella Heidelberg SL476 BBV-0004997 CDS
Automated Process Approved Go view Salmonella Heidelberg SL486 BBW-0004357 CDS
Automated Process Approved Go view Salmonella Kentucky CDC 191 BBZ-0005974 CDS
Automated Process Approved Go view Salmonella Kentucky CVM29188 BBP-0009017 CDS
Automated Process Approved Go view Salmonella Newport SL254 BBQ-0004948 CDS
Automated Process Approved Go view Salmonella Newport SL317 BBR-0007086 CDS
Automated Process Approved Go view Salmonella Paratyphi A AKU_12601 BCH-0002214 CDS
Automated Process Approved Go view Salmonella Paratyphi A ATCC 9150 ADA-0002198 glxK CDS
Automated Process Approved Go view Salmonella Paratyphi B SPB7 BCC-0003052 CDS
Automated Process Approved Go view Salmonella Saintpaul SARA23 BBN-0005236 CDS
Automated Process Approved Go view Salmonella Saintpaul SARA29 BBM-0006231 CDS
Automated Process Approved Go view Salmonella Typhi CT18 ABX-0106419 glxK CDS
Automated Process Approved Go view Salmonella Typhi Ty2 ABS-0084050 glxK CDS
Automated Process Approved Go view Salmonella Typhimurium LT2 [T] ABU-0092154 glxK CDS
Automated Process Approved Go view Salmonella Virchow SL491 BBS-0008958 CDS
Automated Process Approved Go view Salmonella Weltevreden SL484 BBU-0005301 CDS
Automated Process Approved Go view Salmonella enterica CVM23701 BBL-0004913 CDS
Automated Process Approved Go view Shigella dysenteriae 1012 BAA-0005210 CDS
Automated Process Approved Go view Yersinia intermedia ATCC 29909 [T] AEH-0003299 glxK_2 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0008207 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007465 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005888 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007259 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006089 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007924 CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006780 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006772 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0004792 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0000143 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 475443 to 486588
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000506glxRCDSforward475141476019Upstream
AEC-0000507ybbVCDSforward476051476329Upstream
AEC-0000508ybbWCDSforward476188477642Upstream
AEC-0000509allBCDSforward477702479063Upstream
AEC-0000510ybbYCDSforward479120480421Upstream
AEC-0000511glxKCDSforward480443481588Matches
AEC-0000512ylbACDScomplement481816482601Downstream
AEC-0000513allCCDScomplement482612483847Downstream
AEC-0000514allDCDScomplement483869484918Downstream
AEC-0000515fdrACDSforward485235486902Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948