Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000520 (purE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000520 showshow history
Names
purE ECDH10B_0479
Product
N5-carboxyaminoimidazole ribonucleotide mutase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 491146 491655 510 170
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000031 (IPR000031 PurE domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006189 'de novo' IMP biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004638 phosphoribosylaminoimidazole carboxylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name purE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001796
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0479 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product N5-carboxyaminoimidazole ribonucleotide mutase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000031 PurE domain Protein Sequence Similarity - InterPro Domain: IPR000031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0001796 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0001796
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006189 'de novo' IMP biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004638 phosphoribosylaminoimidazole carboxylase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000604 purE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000678 purE CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017168 purE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002525 purE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000402 purE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006568 purE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000587 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005985 purE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000494 purE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0009070 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009328 purE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008476 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076712 purE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005967 purE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0007860 purE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000478 purE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005011 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001631 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010796 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008378 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005641 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0005970 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005464 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007241 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009197 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006588 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007916 purE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0005912 purE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0005849 purE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0006686 purE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024530 purE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007355 purE CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005280 purE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0001796 purE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000526 purE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000557 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000567 purE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130477 purE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005223 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000552 purE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063444 purE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0002710 purE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001974 purE CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000421 purE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004758 purE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002539 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000665 purE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0004858 purE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0001739 purE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0001694 purE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005594 purE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005007 purE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004366 purE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007808 purE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005983 purE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0009026 purE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0004957 purE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007096 purE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002205 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002189 purE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0003043 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005246 purE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006222 purE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004669 purE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008212 purE CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106433 purE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0084041 purE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092177 purE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008948 purE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005292 purE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0004922 purE CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000454 purE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005849 purE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005222 purE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000301 purE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071438 purE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086811 purE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000502 purE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000533 purE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001368 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008839 purE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001792 purE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000805 purE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001558 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236210 purE CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005384 purE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003088 purE CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0008458 purE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000439 purE CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0125614 purE CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007574 purE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007994 purE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003956 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005035 purE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004580 purE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030760 purE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008819 purE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001233 purE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003257 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005229 purE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007022 purE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001085 purE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001273 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003746 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 486146 to 496655
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000515fdrACDSforward485235486902Downstream
AEC-0000516ylbECDSforward486912488171Downstream
AEC-0000517ylbFCDSforward488182488997Downstream
AEC-0000518ybcFCDSforward488994489887Downstream
AEC-0000519purKCDScomplement490082491149Overlaps Downstream
AEC-0000520purECDScomplement491146491655Matches
AEC-0000521lpxHCDScomplement491773492495Upstream
AEC-0000522ppiBCDScomplement492498492992Upstream
AEC-0000523cysSCDSforward493166494551Upstream
AEC-0000524ybcICDScomplement494587495108Upstream
AEC-0000525ybcJCDScomplement495216495428Upstream
AEC-0000526folDCDScomplement495430496296Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948