Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000581 (entF) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000581 showshow history
Names
entF ECDH10B_0546
Product
enterobactin synthase multienzyme complex component F, ATP-dependent
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 552712 556593 3882 1294
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR009081 (IPR009081 Phosphopantetheine binding ACP domain) Jul 2009
Automated Process Approved IPR010071 (IPR010071 Amino acid adenylation domain) Jul 2009
Automated Process Approved IPR006162 (IPR006162 Phosphopantetheine attachment site) Jul 2009
Automated Process Approved IPR001242 (IPR001242 Condensation domain) Jul 2009
Automated Process Approved IPR000873 (IPR000873 AMP-dependent synthetase/ligase) Jul 2009
Automated Process Approved IPR006163 (IPR006163 (DEPRECATED) Phosphopantetheine-binding) Jul 2009
Automated Process Approved IPR001031 (IPR001031 Thioesterase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000873
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016788 hydrolase activity, acting on ester bonds GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000873
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016874 ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010071
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000036 acyl carrier activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0031177 phosphopantetheine binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006162
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name entF Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002021
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0546 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product enterobactin synthase multienzyme complex component F, ATP-dependent Experimental - PubMed ID: 9485415
Reference: Escherichia coli 		Mar 2007
Protein Family
Automated Process Approved protein family IPR010071 Amino acid adenylation domain Protein Sequence Similarity - InterPro Domain: IPR010071
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR009081 Phosphopantetheine binding ACP domain Protein Sequence Similarity - InterPro Domain: IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006162 Phosphopantetheine attachment site Protein Sequence Similarity - InterPro Domain: IPR006162
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000873 AMP-dependent synthetase/ligase Protein Sequence Similarity - InterPro Domain: IPR000873
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001031 Thioesterase Protein Sequence Similarity - InterPro Domain: IPR001031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006163 (DEPRECATED) Phosphopantetheine-binding Protein Sequence Similarity - InterPro Domain: IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001242 Condensation domain Protein Sequence Similarity - InterPro Domain: IPR001242
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002021 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002021
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000873
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0031177 phosphopantetheine binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006162
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016874 ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010071
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000873
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016788 hydrolase activity, acting on ester bonds GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001031
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000036 acyl carrier activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000036 entF CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000044 entF CDS
Ortholog
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002021 entF CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 547712 to 561593
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004523repeat_regionforward514341740860Contains
AEC-0000015IS186B.2repeat_regionforward546565547903Upstream
AEC-0000577insL-2CDSforward546620547732Upstream
AEC-0000578entDCDScomplement548014548643Upstream
AEC-0000579fepACDScomplement548809551049Upstream
AEC-0000580fesCDSforward551370552494Upstream
AEC-0004054ybdZCDSforward552497552715Overlaps Upstream
AEC-0000581entFCDSforward552712556593Matches
AEC-0000582fepECDSforward556809557942Downstream
AEC-0000583fepCCDScomplement557939558754Downstream
AEC-0000584fepGCDScomplement558751559743Downstream
AEC-0000585fepDCDScomplement559740560744Downstream
AEC-0000586entSCDSforward560855562105Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948