Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000590 (entB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000590 showshow history
Names
entB ECDH10B_0555
Product
isochorismatase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 566249 567106 858 286
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR009081 (IPR009081 Phosphopantetheine binding ACP domain) Jul 2009
Automated Process Approved IPR000868 (IPR000868 Isochorismatase-like) Jul 2009
Automated Process Approved IPR016291 (IPR016291 Isochorismatase) Jul 2009
Automated Process Approved IPR003881 (IPR003881 (DEPRECATED) Isochorismatase, N-terminal) Jul 2009
Automated Process Approved IPR006163 (IPR006163 (DEPRECATED) Phosphopantetheine-binding) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000868
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003881
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008908 isochorismatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003881
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000036 acyl carrier activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000868
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name entB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002052
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0555 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product isochorismatase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR009081 Phosphopantetheine binding ACP domain Protein Sequence Similarity - InterPro Domain: IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000868 Isochorismatase-like Protein Sequence Similarity - InterPro Domain: IPR000868
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003881 (DEPRECATED) Isochorismatase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR003881
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006163 (DEPRECATED) Phosphopantetheine-binding Protein Sequence Similarity - InterPro Domain: IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016291 Isochorismatase Protein Sequence Similarity - InterPro Domain: IPR016291
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002052 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002052
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000868
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003881
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000868
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008908 isochorismatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003881
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000036 acyl carrier activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002335 entB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002389 entB CDS
Ortholog
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002052 entB CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 561249 to 572106
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004523repeat_regionforward514341740860Contains
AEC-0000586entSCDSforward560855562105Upstream
AEC-0000587fepBCDScomplement562109563065Upstream
AEC-0000588entCCDSforward563440564615Upstream
AEC-0000589entECDSforward564625566235Upstream
AEC-0000590entBCDSforward566249567106Matches
AEC-0000591entACDSforward567106567852Overlaps Downstream
AEC-0000592ybdBCDSforward567855568268Downstream
AEC-0000593cstACDSforward568449570554Downstream
AEC-0004055ybdDCDSforward570737570934Downstream
AEC-0000594ybdHCDScomplement570944572032Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948