Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000599 (dsbG) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000599 showshow history
Names
dsbG ECDH10B_0565
Product
periplasmic disulfide isomerase/thiol-disulphide oxidase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 576382 577128 747 249
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012336 (IPR012336 Thioredoxin-like fold) Jul 2009
Automated Process Approved IPR012335 (IPR012335 (DEPRECATED) Thioredoxin fold) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name dsbG Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002084
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0565 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product periplasmic disulfide isomerase/thiol-disulphide oxidase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR012336 Thioredoxin-like fold Protein Sequence Similarity - InterPro Domain: IPR012336
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012335 (DEPRECATED) Thioredoxin fold Protein Sequence Similarity - InterPro Domain: IPR012335
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002084 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002084
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002787 dsbG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002808 dsbG CDS
Ortholog
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002084 dsbG CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 571382 to 582128
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004523repeat_regionforward514341740860Contains
AEC-0000594ybdHCDScomplement570944572032Downstream
AEC-0000595ybdLCDSforward572141573301Downstream
AEC-0000596ybdMCDScomplement573302573931Downstream
AEC-0000597ybdNCDScomplement573904575124Downstream
AEC-0000598ybdOCDScomplement575271576173Downstream
AEC-0000599dsbGCDScomplement576382577128Matches
AEC-0000600ahpCCDSforward577500578063Upstream
AEC-0000601ahpFCDSforward578308579873Upstream
AEC-0000602uspGCDScomplement579994580422Upstream
AEC-0000603ybdRCDSforward580643581881Upstream
AEC-0000604rnkCDScomplement582112582522Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948