Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000665 (fldA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000665 showshow history
Names
fldA ECDH10B_0749
Product
flavodoxin 1
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 762750 763280 531 177
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001226 (IPR001226 Flavodoxin, conserved site) Jul 2009
Automated Process Approved IPR008254 (IPR008254 Flavodoxin/nitric oxide synthase) Jul 2009
Automated Process Approved IPR010086 (IPR010086 Flavodoxin, long chain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0010181 FMN binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fldA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002332
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0749 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product flavodoxin 1 Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001226 Flavodoxin, conserved site Protein Sequence Similarity - InterPro Domain: IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010086 Flavodoxin, long chain Protein Sequence Similarity - InterPro Domain: IPR010086
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008254 Flavodoxin/nitric oxide synthase Protein Sequence Similarity - InterPro Domain: IPR008254
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002332 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002332
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0010181 FMN binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008254
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001426 fldA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001340 fldA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016981 fldA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002400 fldA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000265 fldA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000712 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005838 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000612 fldA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008906 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076855 fldA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000607 fldA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005159 fldA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005977 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010952 fldA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008531 fldA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005796 fldA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005619 fldA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009350 fldA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009061 fldA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006565 fldA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024667 fldA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005411 fldA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002332 fldA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000690 fldA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000763 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000705 fldA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130616 fldA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005364 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000691 fldA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061582 fldA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000751 fldA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000341 fldA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004919 fldA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002364 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000852 fldA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005075 fldA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002216 fldA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002150 fldA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008631 fldA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005179 fldA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004536 fldA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005115 fldA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004322 fldA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005123 fldA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008954 fldA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002060 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002047 fldA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002858 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005414 fldA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008951 fldA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004940 fldA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006022 fldA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106727 fldA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083895 fldA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092640 fldA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008778 fldA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006525 fldA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007141 fldA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000589 fldA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005963 fldA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000700 fldA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071612 fldA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086954 fldA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000682 fldA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000686 fldA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002950 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008616 fldA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003158 fldA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003821 fldA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002211 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236753 fldA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0004426 fldA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002960 fldA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006520 fldA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000839 fldA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124109 fldA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004505 fldA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005327 fldA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000556 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004702 fldA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030878 fldA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008533 fldA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001360 fldA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003142 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005340 fldA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006899 fldA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001185 fldA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001395 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003558 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 757750 to 768280
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000661glnSCDSforward757908759572Downstream
AEC-0000662ybfMCDSforward760149761555Downstream
AEC-0000663ybfNCDSforward761605761931Downstream
AEC-0000664furCDScomplement762015762461Downstream
AEC-0000665fldACDScomplement762750763280Matches
AEC-0000666ybfECDScomplement763420763713Upstream
AEC-0000667ybfFCDScomplement763853764617Upstream
AEC-0000668seqACDSforward764802765347Upstream
AEC-0000669pgmCDSforward765373767013Upstream
AEC-0000670ybfPCDSforward767227767721Upstream
AEC-0000671ybfG_2CDSpcomplement767762768172Upstream
AEC-0004426ybfGpseudogenecomplement767762768412Upstream
AEC-0000672ybfG_1CDSpcomplement768203768412Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948