Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000669 (pgm) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000669 showshow history
Names
pgm ECDH10B_0753
Product
phosphoglucomutase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 765373 767013 1641 547
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR016066 (IPR016066 Alpha-D-phosphohexomutase, conserved site) Jul 2009
Automated Process Approved IPR016055 (IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III) Jul 2009
Automated Process Approved IPR005844 (IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I) Jul 2009
Automated Process Approved IPR005845 (IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II) Jul 2009
Automated Process Approved IPR005846 (IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III) Jul 2009
Automated Process Approved IPR005843 (IPR005843 Alpha-D-phosphohexomutase, C-terminal) Jul 2009
Automated Process Approved IPR005852 (IPR005852 Phosphoglucomutase, alpha-D-glucose specific) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016055
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004614 phosphoglucomutase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005852
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016066
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016868 intramolecular transferase activity, phosphotransferases GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016055
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name pgm Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002345
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0753 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product phosphoglucomutase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II Protein Sequence Similarity - InterPro Domain: IPR005845
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I Protein Sequence Similarity - InterPro Domain: IPR005844
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III Protein Sequence Similarity - InterPro Domain: IPR005846
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005843 Alpha-D-phosphohexomutase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR005843
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005852 Phosphoglucomutase, alpha-D-glucose specific Protein Sequence Similarity - InterPro Domain: IPR005852
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III Protein Sequence Similarity - InterPro Domain: IPR016055
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016066 Alpha-D-phosphohexomutase, conserved site Protein Sequence Similarity - InterPro Domain: IPR016066
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002345 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002345
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0005975 carbohydrate metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016055
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016868 intramolecular transferase activity, phosphotransferases GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016055
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004614 phosphoglucomutase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005852
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016066
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000891 pgm CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000556 pgm CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016975 pgm CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002396 pgm CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000261 pgm CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008564 pgm CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000716 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005834 pgm CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000616 pgm CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008902 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008771 pgm CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007477 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076859 pgm CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009304 pgm CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009374 pgm CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000611 pgm CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005163 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002711 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010956 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008535 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005800 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008720 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005623 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009065 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006569 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010504 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010271 pgm CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007161 pgm CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024671 pgm CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009332 pgm CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005415 pgm CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002345 pgm CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000694 pgm CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000767 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000709 pgm CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130620 pgm CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005368 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000695 pgm CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061588 pgm CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002658 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001622 pgm CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004923 pgm CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002358 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000856 pgm CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005080 pgm CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002225 pgm CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002159 pgm CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008636 pgm CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005184 pgm CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004541 pgm CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007149 pgm CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005119 pgm CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004326 pgm CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005128 pgm CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008949 pgm CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002056 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002043 pgm CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002853 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005419 pgm CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008005 pgm CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004945 pgm CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008031 pgm CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106735 pgm CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083891 pgm CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092652 pgm CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008773 pgm CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006520 pgm CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007146 pgm CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000593 pgm CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0005959 pgm CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006675 pgm CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000704 pgm CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071608 pgm CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086950 pgm CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000678 pgm CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000690 pgm CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002945 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008599 pgm CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003163 pgm CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002134 pgm CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002206 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240319 pgm CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007696 pgm CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002904 pgm CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006467 pgm CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000796 pgm CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124278 pgm CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004454 pgm CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005378 pgm CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002272 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004755 pgm CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030928 pgm CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007258 pgm CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001419 pgm CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001896 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005291 pgm CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005055 pgm CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003019 pgm CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003629 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001351 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 760373 to 772013
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000662ybfMCDSforward760149761555Upstream
AEC-0000663ybfNCDSforward761605761931Upstream
AEC-0000664furCDScomplement762015762461Upstream
AEC-0000665fldACDScomplement762750763280Upstream
AEC-0000666ybfECDScomplement763420763713Upstream
AEC-0000667ybfFCDScomplement763853764617Upstream
AEC-0000668seqACDSforward764802765347Upstream
AEC-0000669pgmCDSforward765373767013Matches
AEC-0000670ybfPCDSforward767227767721Downstream
AEC-0000671ybfG_2CDSpcomplement767762768172Downstream
AEC-0004426ybfGpseudogenecomplement767762768412Downstream
AEC-0000672ybfG_1CDSpcomplement768203768412Downstream
AEC-0004541ybfIpseudogenecomplement768536768679Downstream
AEC-0000673potECDScomplement768761770080Downstream
AEC-0000674speFCDScomplement770077772275Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948