Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000677 (kdpC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000677 showshow history
Names
kdpC ECDH10B_0762
Product
potassium translocating ATPase, subunit C
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 776222 776794 573 191
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003820 (IPR003820 Potassium-transporting ATPase C chain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name kdpC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002374
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0762 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product potassium translocating ATPase, subunit C Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003820 Potassium-transporting ATPase C chain Protein Sequence Similarity - InterPro Domain: IPR003820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002374 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002374
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006813 potassium ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008556 P-type potassium transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003820
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001667 kdpC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001594 kdpC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0016970 kdpC CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0003472 kdpC CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000255 kdpC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008556 kdpC CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000722 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005825 kdpC CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000621 kdpC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008893 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008764 kdpC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007471 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076865 kdpC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009298 kdpC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009381 kdpC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000616 kdpC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005169 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002716 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010962 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008541 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005806 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008726 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005629 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009596 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009362 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009071 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006575 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010510 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010265 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007167 kdpC CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024678 kdpC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009325 kdpC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005423 kdpC CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002374 kdpC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000702 kdpC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000773 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000717 kdpC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130625 kdpC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005373 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000702 kdpC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061592 kdpC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000759 kdpC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001558 kdpC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004930 kdpC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002352 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000862 kdpC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005086 kdpC CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002251 kdpC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002185 kdpC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008643 kdpC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005191 kdpC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004548 kdpC CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007156 kdpC CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005126 kdpC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004333 kdpC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005135 kdpC CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008942 kdpC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0002050 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0002037 kdpC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002845 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005426 kdpC CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007998 kdpC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0004952 kdpC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008038 kdpC CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106753 kdpC CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083885 kdpC CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092666 kdpC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008766 kdpC CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006513 kdpC CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007153 kdpC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006683 kdpC CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000707 kdpC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071603 kdpC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000672 kdpC CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000695 kdpC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003501 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008573 kdpC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003685 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002138 kdpC CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002201 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240332 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007702 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002911 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0006461 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000790 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0124299 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004449 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005384 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002276 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006217 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004761 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030933 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007264 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001426 kdpC CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001888 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005285 kdpC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005060 kdpC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0003014 kdpC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003622 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001357 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 771222 to 781794
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000674speFCDScomplement770077772275Downstream
AEC-0000675kdpECDScomplement772871773548Downstream
AEC-0000676kdpDCDScomplement773545776229Overlaps Downstream
AEC-0000677kdpCCDScomplement776222776794Matches
AEC-0000678kdpBCDScomplement776803778851Upstream
AEC-0000679kdpACDScomplement778874780547Upstream
AEC-0004056kdpFCDScomplement780547780636Upstream
AEC-0000680ybfACDSforward780949781155Upstream
AEC-0000681rhsCCDSforward781398785591Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948