Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000710 (mngA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000710 showshow history
Names
mngA ECDH10B_0797
Product
fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component; IIB component; IIC component
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 817799 819775 1977 659
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002178 (IPR002178 PTS EIIA type-2 domain) Jul 2009
Automated Process Approved IPR003353 (IPR003353 Phosphotransferase system, fructose-specific IIB subunit) Jul 2009
Automated Process Approved IPR003352 (IPR003352 Phosphotransferase system, EIIC) Jul 2009
Automated Process Approved IPR016152 (IPR016152 Phosphotransferase/anion transporter) Jul 2009
Automated Process Approved IPR004715 (IPR004715 Phosphotransferase system, IIA component fructose subfamily) Jul 2009
Automated Process Approved IPR006327 (IPR006327 Phosphotransferase system, fructose IIC component) Jul 2009
Automated Process Approved IPR013011 (IPR013011 Phosphotransferase system, EIIB component, type 2) Jul 2009
Automated Process Approved IPR013014 (IPR013014 Phosphotransferase system, EIIC component, type 2) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016152
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mngA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002493
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0797 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component; IIB component; IIC component Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR016152 Phosphotransferase/anion transporter Protein Sequence Similarity - InterPro Domain: IPR016152
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003352 Phosphotransferase system, EIIC Protein Sequence Similarity - InterPro Domain: IPR003352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004715 Phosphotransferase system, IIA component fructose subfamily Protein Sequence Similarity - InterPro Domain: IPR004715
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006327 Phosphotransferase system, fructose IIC component Protein Sequence Similarity - InterPro Domain: IPR006327
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013014 Phosphotransferase system, EIIC component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013014
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013011 Phosphotransferase system, EIIB component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013011
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003353 Phosphotransferase system, fructose-specific IIB subunit Protein Sequence Similarity - InterPro Domain: IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002178 PTS EIIA type-2 domain Protein Sequence Similarity - InterPro Domain: IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002493 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002493
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016152
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002178
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0004970 mngA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0005275 mngA CDS
Ortholog
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008522 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005786 CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008851 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007439 CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009263 CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005203 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005458 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002493 mngA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000737 mngA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000807 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000634 hrsA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006047 CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006721 CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071568 hrsA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086917 hrsA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000732 mngA CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 812799 to 824775
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000705sucACDSforward810521813322Upstream
AEC-0000706sucBCDSforward813337814554Upstream
AEC-0000707sucCCDSforward814829815995Upstream
AEC-0000708sucDCDSforward815995816864Upstream
AEC-0000709mngRCDScomplement816968817690Upstream
AEC-0000710mngACDSforward817799819775Matches
AEC-0000711mngBCDSforward819793822426Downstream
AEC-0000712cydACDSforward823273824841Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948