Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000726 (aroG) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000726 showshow history
Names
aroG ECDH10B_0821
Product
3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 837448 838500 1053 351
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006218 (IPR006218 DAHP synthetase I/KDSA) Jul 2009
Automated Process Approved IPR006219 (IPR006219 DHAP synthase, class 1) Jul 2009
Automated Process Approved IPR013785 (IPR013785 Aldolase-type TIM barrel) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006218
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009073 aromatic amino acid family biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006219
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006219
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name aroG Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002560
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0821 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR006218 DAHP synthetase I/KDSA Protein Sequence Similarity - InterPro Domain: IPR006218
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006219 DHAP synthase, class 1 Protein Sequence Similarity - InterPro Domain: IPR006219
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013785 Aldolase-type TIM barrel Protein Sequence Similarity - InterPro Domain: IPR013785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002560 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002560
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009073 aromatic amino acid family biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006219
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009058 biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006218
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006219
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013785
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001356 aroG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001409 aroG CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020548 aroG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002353 aroG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000191 aroG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009117 aroG CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000772 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005761 aroG CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000660 aroG CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008820 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009501 aroG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008844 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076921 aroG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007981 aroG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009439 aroG CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000671 aroG CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005227 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001908 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009559 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008608 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005873 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008359 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005696 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009079 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009432 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008973 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006642 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008919 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008527 aroG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007234 aroG CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024753 aroG CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009450 aroG CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005487 aroG CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002560 aroG CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000761 aroG CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000831 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000776 aroG CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130691 aroG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005433 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000753 aroG CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061635 aroG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000802 aroG CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001564 aroG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004112 aroG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004974 aroG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002287 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000909 aroG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005129 aroG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002392 aroG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002318 aroG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008688 aroG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005252 aroG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004609 aroG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007215 aroG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005170 aroG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004378 aroG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005194 aroG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0009296 aroG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001995 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001983 aroG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002776 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005481 aroG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005877 aroG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005008 aroG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006031 aroG CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106850 aroG CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083832 aroG CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092839 aroG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008709 aroG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006456 aroG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008465 aroG CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000655 aroG CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006072 aroG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007974 aroG CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000785 aroG CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071546 aroG CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086898 aroG CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000620 aroG CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000757 aroG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002919 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008447 aroG CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002346 aroG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003619 aroG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003137 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236637 aroG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005516 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000748 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005195 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0004298 aroG_1 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008033 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004813 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003362 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007640 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005389 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032796 aroG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005507 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003447 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005965 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006852 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001233 aroG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001469 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003503 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 832448 to 843500
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004124valTtRNAforward832580832655Upstream
AEC-0004125lysWtRNAforward832658832733Upstream
AEC-0004126valZtRNAforward832883832958Upstream
AEC-0004127lysYtRNAforward832962833037Upstream
AEC-0004128lysZtRNAforward833184833259Upstream
AEC-0004129lysQtRNAforward833392833467Upstream
AEC-0000722nadACDSforward833900834943Upstream
AEC-0000723pnuCCDSforward834981835700Upstream
AEC-0000724zitBCDScomplement835697836638Upstream
AEC-0000725ybgSCDScomplement836752837132Upstream
AEC-0000726aroGCDSforward837448838500Matches
AEC-0000727gpmACDScomplement838658839410Downstream
AEC-0000728galMCDScomplement839612840652Downstream
AEC-0004427galKpseudogenecomplement840646841633(Interval #2) Downstream
AEC-0000020IS2.2repeat_regioncomplement841632842962Downstream
AEC-0004427galKpseudogenecomplement842970843130(Interval #1) Downstream
AEC-0004428galTCDScomplement843134844180Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948