Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000732 (modA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000732 showshow history
Names
modA ECDH10B_0831
Product
molybdate transporter subunit; periplasmic-binding component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 848240 849013 774 258
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR006059 (IPR006059 Bacterial extracellular solute-binding protein) Jul 2009
Automated Process Approved IPR010916 (IPR010916 TonB box, conserved site) Jul 2009
Automated Process Approved IPR005950 (IPR005950 Molybdate ABC transporter, substrate-binding protein) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0015689 molybdate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005950
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006059
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005950
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015412 ABC-type molybdate transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005950
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006059
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name modA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002601
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0831 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product molybdate transporter subunit; periplasmic-binding component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR006059 Bacterial extracellular solute-binding protein Protein Sequence Similarity - InterPro Domain: IPR006059
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010916 TonB box, conserved site Protein Sequence Similarity - InterPro Domain: IPR010916
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR005950 Molybdate ABC transporter, substrate-binding protein Protein Sequence Similarity - InterPro Domain: IPR005950
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002601 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002601
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0015689 molybdate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005950
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006059
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0030288 outer membrane-bounded periplasmic space GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005950
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006059
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015412 ABC-type molybdate transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR005950
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000945 modA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001095 modA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020567 modA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002343 modA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000174 modA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009108 modA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000782 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005751 modA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000668 modA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008810 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009492 modA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008835 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076931 modA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007991 modA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009448 modA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000680 modA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005236 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001918 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009569 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008618 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005883 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008369 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005706 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009069 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009442 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008983 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006652 modA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008929 modA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008517 modA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007244 modA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024762 modA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009459 modA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005496 modA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002601 modA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000770 modA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000840 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000785 modA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130700 modA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005444 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000763 modA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061647 modA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000803 modA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001565 modA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004127 modA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004995 modA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002272 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000934 modA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005150 modA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002463 modA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002385 modA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008111 modA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005273 modA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004630 modA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007227 modA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005191 modA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004399 modA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005215 modA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007740 modA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001983 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001971 modA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002752 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005502 modA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005855 modA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005020 modA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006043 modA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106881 modA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083820 modA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092897 modA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008688 modA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006435 modA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008486 modA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000664 modA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006081 modA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007983 modA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000794 modA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071535 modA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086889 modA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000611 modA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000766 modA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002908 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008408 modA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002334 modA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003609 modA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003127 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236611 modA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005529 modA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001281 modA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005209 modA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002222 modA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119013 modA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008049 modA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004798 modA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003496 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007657 modA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005376 modA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032784 modA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005492 modA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003431 modA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003064 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006340 modA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006840 modA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001244 modA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001484 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003487 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 843240 to 854013
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004428galTCDScomplement843134844180Upstream
AEC-0004429galECDScomplement844190845206Upstream
AEC-0000729modFCDScomplement845467846939Upstream
AEC-0000730modECDScomplement847007847795Upstream
AEC-0000731ybhTCDSforward847924848073Upstream
AEC-0000732modACDSforward848240849013Matches
AEC-0000733modBCDSforward849013849702Overlaps Downstream
AEC-0000734modCCDSforward849705850763Downstream
AEC-0000735ybhACDScomplement850764851582Downstream
AEC-0000736pglCDSforward851737852732Downstream
AEC-0000737ybhDCDScomplement852773853726Downstream
AEC-0000738ybhHCDSforward853910854962Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948