Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000733 (modB) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000733 showshow history
Names
modB ECDH10B_0832
Product
molybdate transporter subunit; membrane component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 849013 849702 690 230
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000515 (IPR000515 ABC transporter type 1, transmembrane domain MetI-like) Jul 2009
Automated Process Approved IPR011867 (IPR011867 Molybdate ABC transporter, permease protein) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015689 molybdate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015098 molybdate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name modB Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002603
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0832 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product molybdate transporter subunit; membrane component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000515 ABC transporter type 1, transmembrane domain MetI-like Protein Sequence Similarity - InterPro Domain: IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011867 Molybdate ABC transporter, permease protein Protein Sequence Similarity - InterPro Domain: IPR011867
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002603 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002603
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015689 molybdate ion transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015098 molybdate ion transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011867
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR000515
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001172 modB CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001421 modB CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020568 modB CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002342 modB CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000173 modB CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009107 modB CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000783 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005750 modB CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000669 modB CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008809 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009491 modB CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008834 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076932 modB CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007992 modB CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0009449 modB CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000681 modB CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005237 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001919 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009570 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008619 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005884 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008370 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005707 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009068 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009443 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008984 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006653 modB CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008930 modB CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008516 modB CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007245 modB CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024763 modB CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009460 modB CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005497 modB CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002603 modB CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000771 modB CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000841 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000786 modB CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130701 modB CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005445 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000764 modB CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061648 modB CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000804 modB CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0003659 modB CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004128 modB CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0004996 modB CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002271 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000935 modB CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005151 modB CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002468 modB CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002390 modB CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008110 modB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005274 modB CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004631 modB CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007228 modB CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005192 modB CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004400 modB CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005216 modB CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007741 modB CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001982 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001970 modB CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002751 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005503 modB CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005854 modB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005021 modB CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006044 modB CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106882 modB CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083819 modB CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092900 modB CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008687 modB CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006434 modB CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008487 modB CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000665 modB CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006082 modB CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007984 modB CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000795 modB CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071534 modB CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0086888 modB CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000610 modB CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000767 modB CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002907 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008405 chlJ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002333 modB_2 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003608 modB CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003126 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236605 modB CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005530 modB CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001283 modB CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005210 modB CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002221 modB CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119015 modB CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008050 modB CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004797 modB CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003497 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007658 modB CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005375 modB CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032783 modB CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005491 modB CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003430 modB CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003063 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006339 modB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006839 modB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001245 modB CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001486 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003486 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 844013 to 854702
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004428galTCDScomplement843134844180Upstream
AEC-0004429galECDScomplement844190845206Upstream
AEC-0000729modFCDScomplement845467846939Upstream
AEC-0000730modECDScomplement847007847795Upstream
AEC-0000731ybhTCDSforward847924848073Upstream
AEC-0000732modACDSforward848240849013Overlaps Upstream
AEC-0000733modBCDSforward849013849702Matches
AEC-0000734modCCDSforward849705850763Downstream
AEC-0000735ybhACDScomplement850764851582Downstream
AEC-0000736pglCDSforward851737852732Downstream
AEC-0000737ybhDCDScomplement852773853726Downstream
AEC-0000738ybhHCDSforward853910854962Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948