Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000745 (bioC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000745 showshow history
Names
bioC ECDH10B_0845
Product
malonyl-CoA methyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 864673 865428 756 252
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR013216 (IPR013216 Methyltransferase type 11) Jul 2009
Automated Process Approved IPR011814 (IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013216
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009102 biotin biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011814
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008168 methyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013216
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name bioC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002648
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0845 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Uncurated product malonyl-CoA methyltransferase Experimental - PubMed ID: 20693992
Reference: Escherichia coli K-12 MG1655 		Jan 2012
Protein Family
Automated Process Approved protein family IPR013216 Methyltransferase type 11 Protein Sequence Similarity - InterPro Domain: IPR013216
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC Protein Sequence Similarity - InterPro Domain: IPR011814
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002648 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002648
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009102 biotin biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011814
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013216
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008168 methyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013216
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000501 bioC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000760 bioC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020210 bioC CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002333 bioC CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000109 bioC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009093 bioC CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000798 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005734 bioC CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000682 bioC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008774 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009840 bioC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008820 BioC CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076948 bioC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008093 bioC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010608 bioC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000771 bioC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005286 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001983 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009627 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008676 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005943 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008427 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005765 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009010 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009502 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009042 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006712 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008987 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008458 bioC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007304 bioC CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024819 bioC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009475 bioC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005510 bioC CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002648 bioC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000784 bioC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000854 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000799 bioC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130768 bioC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005509 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000777 bioC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063096 bioC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001663 bioC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001925 bioC CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004392 bioC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005010 bioC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002240 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000949 bioC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005165 bioC CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002515 bioC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002435 bioC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008096 bioC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005288 bioC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004645 bioC CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007245 bioC CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005206 bioC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004414 bioC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005230 bioC CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007755 bioC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001968 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001956 bioC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002736 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005517 bioC CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005840 bioC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005035 bioC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006058 bioC CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106923 bioC CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083805 bioC CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0092946 bioC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008644 bioC CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006415 bioC CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008501 bioC CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000725 bioC CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007986 bioC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007936 bioC CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000934 bioC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071768 bioC CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087084 bioC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000803 bioC CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000816 bioC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002400 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008382 bioC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002325 bioC_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003402 bioC CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002892 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0236597 bioC CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005537 bioC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001290 bioC CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005217 bioC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002214 bioC CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119038 bioC CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008057 bioC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004790 bioC CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003001 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007665 bioC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005368 bioC CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032776 bioC CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005484 bioC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003423 bioC CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003056 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006332 bioC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006832 bioC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001252 bioC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001493 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003479 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 859673 to 870428
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000741ybhCCDScomplement859149860432Upstream
AEC-0004430attLAMmisc_featureforward860479860493Upstream
AEC-0000742ybhBCDScomplement860584861060Upstream
AEC-0004431bioACDScomplement861119862408Upstream
AEC-0000743bioBCDSforward862495863535Upstream
AEC-0000744bioFCDSforward863532864686Overlaps Upstream
AEC-0000745bioCCDSforward864673865428Matches
AEC-0000746bioDCDSforward865421866098Overlaps Downstream
AEC-0000747uvrBCDSforward866677868698Downstream
AEC-0000748ybhKCDScomplement868890869798Downstream
AEC-0000749moaACDSforward870195871184Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948