Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000777 (glnQ) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000777 showshow history
Names
glnQ ECDH10B_0877
Product
glutamine transporter subunit; ATP-binding component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 898892 899614 723 241
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Jul 2009
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name glnQ Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002764
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0877 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product glutamine transporter subunit; ATP-binding component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002764 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002764
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001801 glnQ CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001918 glnQ CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018918 glnQ CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002278 glnQ CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000078 glnQ CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007636 glnQ CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000830 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005699 glnQ CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000716 glnQ CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008736 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007795 glnQ CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006288 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0076985 glnQ CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007822 glnQ CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008230 glnQ CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000803 glnQ CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005324 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002020 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009660 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008710 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0005976 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008100 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005798 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009779 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009539 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008538 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006746 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009827 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007623 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007337 glnQ CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024853 glnQ CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008917 glnQ_1 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005544 glnQ CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002764 glnQ CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000816 glnQ CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000889 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000832 glnQ CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130800 glnQ CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005546 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000814 glnQ CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063043 glnQ CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001621 glnQ CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002987 glnQ CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004474 glnQ CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005042 glnQ CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002209 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0000982 glnQ CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005197 glnQ CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002608 glnQ CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002527 glnQ CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008065 glnQ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005320 glnQ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004676 glnQ CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007277 glnQ CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005247 glnQ CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004455 glnQ CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005262 glnQ CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007794 glnQ CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001937 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001925 glnQ CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002687 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005548 glnQ CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005799 glnQ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005065 glnQ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006088 glnQ CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0106981 glnQ CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083774 glnQ CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0093037 glnQ CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008613 glnQ CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006381 glnQ CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006327 glnQ CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000764 glnQ CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007950 glnQ CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005656 glnQ CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000884 glnQ CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071806 glnQ CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087116 glnQ CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000837 glnQ CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000850 glnQ CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001112 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008210 glnQ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002269 glnQ_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001296 glnQ CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002588 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239865 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005889 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002425 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007889 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000950 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123672 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004659 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005558 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003294 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006877 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0008316 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031363 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008249 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002543 glnQ CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002312 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005812 glnQ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005459 glnQ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002638 glnQ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003158 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001876 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 893892 to 904614
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000773fiuCDScomplement892400894682Downstream
AEC-0000774ybiMCDScomplement894947895207Downstream
AEC-0000775ybiNCDSforward895483896409Downstream
AEC-0000776ybiOCDScomplement896406898631Downstream
AEC-0000777glnQCDScomplement898892899614Matches
AEC-0000778glnPCDScomplement899611900270Overlaps Upstream
AEC-0000779glnHCDScomplement900409901155Upstream
AEC-0000780dpsCDScomplement901559902062Upstream
AEC-0000781rhtACDScomplement902361903248Upstream
AEC-0000782ompXCDSforward903601904116Upstream
AEC-0000783ybiPCDScomplement904165905748Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948