Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000817 (grxA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000817 showshow history
Names
grxA ECDH10B_0919
Product
glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a)
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 943647 943904 258 86
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012336 (IPR012336 Thioredoxin-like fold) Jul 2009
Automated Process Approved IPR014025 (IPR014025 Glutaredoxin subgroup) Jul 2009
Automated Process Approved IPR002109 (IPR002109 Glutaredoxin) Jul 2009
Automated Process Approved IPR011767 (IPR011767 Glutaredoxin active site) Jul 2009
Automated Process Approved IPR012335 (IPR012335 (DEPRECATED) Thioredoxin fold) Jul 2009
Automated Process Approved IPR011902 (IPR011902 Glutaredoxin, GrxA) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0045454 cell redox homeostasis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015035 protein-disulfide reductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name grxA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002893
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0919 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR002109 Glutaredoxin Protein Sequence Similarity - InterPro Domain: IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011767 Glutaredoxin active site Protein Sequence Similarity - InterPro Domain: IPR011767
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012335 (DEPRECATED) Thioredoxin fold Protein Sequence Similarity - InterPro Domain: IPR012335
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011902 Glutaredoxin, GrxA Protein Sequence Similarity - InterPro Domain: IPR011902
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014025 Glutaredoxin subgroup Protein Sequence Similarity - InterPro Domain: IPR014025
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012336 Thioredoxin-like fold Protein Sequence Similarity - InterPro Domain: IPR012336
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002893 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002893
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0045454 cell redox homeostasis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015035 protein-disulfide reductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001447 grxA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001730 grxA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019825 grxA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002250 grxA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0000030 grxA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007693 grxA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000870 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005658 grxA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000758 grxA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008634 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007751 grxA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006335 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077073 grxA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007780 grxA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008188 grxA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000892 grxA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005367 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002067 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009705 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008755 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006021 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008144 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005843 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008975 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009585 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008583 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006791 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008866 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007578 grxA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007382 grxA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024899 grxA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005631 grxA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002893 grxA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000858 grxA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000931 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000875 grxA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130842 grxA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005592 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000854 grxA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062949 grxA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001533 grxA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000697 grxA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002040 grxA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005087 grxA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002164 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001030 grxA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005250 grxA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002770 grxA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002686 grxA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008012 grxA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005370 grxA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004728 grxA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007327 grxA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005291 grxA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004498 grxA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005314 grxA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007847 grxA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001902 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001890 grxA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002630 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005600 grxA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005744 grxA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005114 grxA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006137 grxA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107075 grxA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083738 grxA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0093172 grxA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008556 grxA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006328 grxA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006378 grxA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000856 grxA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007894 grxA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005706 grxA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0000839 grxA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071852 grxA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087157 grxA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000879 grxA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000897 grxA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002132 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004489 grxA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001275 grxA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003316 grxA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003201 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237231 grxA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005672 grxA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000758 grxA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005439 grxA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002057 grxA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119693 grxA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006198 grxA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004597 grxA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003919 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005253 grxA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005142 grxA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032596 grxA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005292 grxA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003187 grxA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002843 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005953 grxA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006633 grxA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001430 grxA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001725 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003242 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 938647 to 948904
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000812ybjICDScomplement938467939282Downstream
AEC-0000813ybjJCDScomplement939282940490Downstream
AEC-0000814ybjKCDSforward940574941110Downstream
AEC-0004245rybBncRNAcomplement941127941205Downstream
AEC-0000815ybjLCDScomplement941285942970Downstream
AEC-0000816ybjMCDSforward943240943617Downstream
AEC-0000817grxACDScomplement943647943904Matches
AEC-0000818ybjCCDSforward944064944351Upstream
AEC-0000819nfsACDSforward944335945057Upstream
AEC-0000820rimKCDSforward945118946020Upstream
AEC-0000821ybjNCDSforward946108946584Upstream
AEC-0000822potFCDSforward946935948047Upstream
AEC-0000823potGCDSforward948142949275Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948