Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000832 (artP) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000832 showshow history
Names
artP ECDH10B_0934
Product
arginine transporter subunit; ATP-binding component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 956157 956885 729 243
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Jul 2009
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name artP Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002939
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0934 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product arginine transporter subunit; ATP-binding component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0002939 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0002939
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001367 artP CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001189 artP CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018168 artP CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002237 artP CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004774 artP CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007710 artP CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000886 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005641 artP CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000773 artP CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008615 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007736 artP CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006350 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077088 artP CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007764 artP CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008172 artP CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000907 artP CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005383 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002086 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009726 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008776 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006042 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008165 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005864 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008996 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009607 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008604 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0006812 artP CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008845 artP CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007557 artP CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007401 artP CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0024918 artP CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007107 artP CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005647 artP CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0002939 artP CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000873 artP CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000946 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000891 artP CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130860 artP CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005611 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000869 artP CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062935 artP CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001538 artP CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001873 artP CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002025 artP CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005106 artP CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002145 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001048 artP CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005268 artP CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002829 artP CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002740 artP CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007994 artP CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005390 artP CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004747 artP CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007347 artP CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005309 artP CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004516 artP CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005332 artP CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007866 artP CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001883 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001871 artP CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002610 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005619 artP CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005724 artP CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005134 artP CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006157 artP CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107114 artP CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083719 artP CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0093223 artP CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008536 artP CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006310 artP CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006396 artP CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000871 artP CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007878 artP CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005725 artP CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002766 artP CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071869 artP CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087173 artP CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000894 artP CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000912 artP CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001461 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004536 artP CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001289 artP CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001006 artP CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000594 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237165 artP CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005695 artP CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000787 artP CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005467 artP CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001973 artP CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119796 artP CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006224 artP CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004570 artP CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008352 artP CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005116 artP CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032570 artP CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005264 artP CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003158 artP CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002812 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005925 artP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006610 artP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001450 artP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001755 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003211 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 951157 to 961885
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000826ybjOCDSforward951140951628Downstream
AEC-0000827rumBCDSforward951669952796Downstream
AEC-0000828artJCDScomplement952995953726Downstream
AEC-0000829artMCDScomplement954017954685Downstream
AEC-0000830artQCDScomplement954685955401Downstream
AEC-0000831artICDScomplement955408956139Downstream
AEC-0000832artPCDScomplement956157956885Matches
AEC-0000833ybjPCDScomplement957103957618Upstream
AEC-0000834ybjQCDSforward957744958067Upstream
AEC-0000835ybjRCDSforward958064958894Upstream
AEC-0000836ybjSCDScomplement958891959904Upstream
AEC-0000837ybjTCDScomplement960003961433Upstream
AEC-0000838ltaECDScomplement961444962445Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948