Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000874 (aroA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000874 showshow history
Names
aroA ECDH10B_0978
Product
5-enolpyruvylshikimate-3-phosphate synthetase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1011963 1013246 1284 428
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR013792 (IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta) Jul 2009
Automated Process Approved IPR006264 (IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase) Jul 2009
Automated Process Approved IPR001986 (IPR001986 Enolpyruvate transferase domain) Jul 2009
Automated Process Approved IPR016228 (IPR016228 (DEPRECATED) 3-phosphoshikimate 1-carboxyvinyltransferase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009073 aromatic amino acid family biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016228
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016228
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006264
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013792
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name aroA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003095
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_0978 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product 5-enolpyruvylshikimate-3-phosphate synthetase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta Protein Sequence Similarity - InterPro Domain: IPR013792
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase Protein Sequence Similarity - InterPro Domain: IPR006264
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001986 Enolpyruvate transferase domain Protein Sequence Similarity - InterPro Domain: IPR001986
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016228 (DEPRECATED) 3-phosphoshikimate 1-carboxyvinyltransferase Protein Sequence Similarity - InterPro Domain: IPR016228
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0003095 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003095
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009073 aromatic amino acid family biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016228
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016228
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006264
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013792
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000368 aroA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000294 aroA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020658 aroA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002213 aroA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004633 aroA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0007980 aroA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000927 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005574 aroA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000856 aroA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008560 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0007968 aroA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0007217 aroA pseudogene
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077138 aroA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009400 aroA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008441 aroA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000948 aroA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005450 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004102 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0009772 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008821 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010324 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005909 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008832 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009661 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008928 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009317 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008543 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009099 aroA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007642 aroA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025072 aroA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007168 aroA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005693 aroA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0003095 aroA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000917 aroA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0000992 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002212 aroA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130905 aroA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005673 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0000982 aroA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062857 aroA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001593 aroA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002939 aroA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001992 aroA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005162 aroA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002086 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001106 aroA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005316 aroA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0002994 aroA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0002896 aroA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007946 aroA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005440 aroA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004798 aroA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007394 aroA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0005380 aroA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004589 aroA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005380 aroA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007915 aroA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001832 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001820 aroA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002551 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005668 aroA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005678 aroA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005180 aroA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107208 aroA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083670 aroA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0093487 aroA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008486 aroA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0009052 aroA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008763 aroA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002433 aroA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007831 aroA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007161 aroA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002709 aroA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0071995 aroA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087256 aroA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0000961 aroA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0000977 aroA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001425 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004671 aroA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001328 aroA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000972 aroA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000630 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237056 aroA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006066 aroA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000839 aroA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005510 aroA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002010 aroA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119944 aroA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006267 aroA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004527 aroA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002109 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008309 aroA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005070 aroA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032522 aroA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005221 aroA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003104 aroA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002761 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005880 aroA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006567 aroA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001487 aroA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001804 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003161 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1006963 to 1018246
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000870focACDScomplement10067601007617Upstream
AEC-0000871ycaOCDScomplement10080231009783Upstream
AEC-0000872ycaPCDSforward10099131010605Upstream
AEC-0000873serCCDSforward10108041011892Upstream
AEC-0000874aroACDSforward10119631013246Matches
AEC-0000875ycaLCDSforward10134151014179Downstream
AEC-0000876cmkCDSforward10143521015035Downstream
AEC-0000877rpsACDSforward10151461016819Downstream
AEC-0000878ihfBCDSforward10169791017263Downstream
AEC-0000879ycaICDSforward10174711019735Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948