Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0000927 (mgsA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0000927 showshow history
Names
mgsA ECDH10B_1033
Product
methylglyoxal synthase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1079708 1080166 459 153
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004363 (IPR004363 Methylglyoxal synthase) Jul 2009
Automated Process Approved IPR011607 (IPR011607 Methylglyoxal synthase-like domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0019242 methylglyoxal biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004363
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004363
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008929 methylglyoxal synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004363
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name mgsA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003259
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1033 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product methylglyoxal synthase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004363 Methylglyoxal synthase Protein Sequence Similarity - InterPro Domain: IPR004363
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011607 Methylglyoxal synthase-like domain Protein Sequence Similarity - InterPro Domain: IPR011607
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0003259 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003259
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0019242 methylglyoxal biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004363
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004363
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008929 methylglyoxal synthase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004363
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001489 mgsA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001342 mgsA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0018829 mgsA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002166 mgsA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004588 mgsA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009469 mgsA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0000977 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005517 mgsA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0000903 mgsA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008490 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006712 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077193 mgsA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008632 mgsA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010787 mgsA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0000996 mgsA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005522 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004976 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0008879 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0007484 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009385 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0005967 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010007 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0009737 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010838 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010776 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009030 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007701 mgsA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025128 mgsA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0007439 mgsA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005750 mgsA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0003259 mgsA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0000972 mgsA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001050 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002155 mgsA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0130961 mgsA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0005735 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001032 mgsA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062015 mgsA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001184 mgsA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001651 mgsA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003304 mgsA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005212 mgsA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0002024 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001223 mgsA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005424 mgsA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0003177 mgsA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0003057 mgsA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008507 mgsA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005549 mgsA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007541 mgsA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0007970 mgsA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007757 mgsA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004639 mgsA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005486 mgsA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008748 mgsA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001786 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001774 mgsA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002494 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005719 mgsA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007796 mgsA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005227 mgsA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006419 mgsA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107365 mgsA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083558 mgsA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0093794 mgsA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008382 mgsA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008029 mgsA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008945 mgsA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002512 mgsA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007764 mgsA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004937 mgsA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0001057 mgsA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072068 mgsA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087316 mgsA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001032 mgsA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001038 mgsA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003598 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004824 mgsA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001375 mgsA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000926 mgsA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000674 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237464 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007325 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000897 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005562 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001948 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120112 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008464 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004477 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0003662 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009593 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005017 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032464 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005169 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003049 mgsA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001834 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008640 mgsA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006519 mgsA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001531 mgsA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001859 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003109 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1074708 to 1085166
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0000923sxyCDSforward10742891074918Downstream
AEC-0000924yccSCDScomplement10748811077034Downstream
AEC-0000925yccFCDScomplement10770531077499Downstream
AEC-0000926helDCDSforward10776221079676Downstream
AEC-0000927mgsACDScomplement10797081080166Matches
AEC-0000928yccTCDScomplement10802621080924Upstream
AEC-0000929yccUCDSforward10810971081510Upstream
AEC-0000930hspQCDScomplement10815551081872Upstream
AEC-0000931yccWCDScomplement10819301083120Upstream
AEC-0000932yccXCDSforward10832151083493Upstream
AEC-0000933yccKCDScomplement10834901083819Upstream
AEC-0000934yccACDScomplement10839101084569Upstream
AEC-0004131serTtRNAcomplement10847761084863Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948