Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001046 (acpP) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001046 showshow history
Names
acpP ECDH10B_1166
Product
acyl carrier protein (ACP)
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1206283 1206519 237 79
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR009081 (IPR009081 Phosphopantetheine binding ACP domain) Jul 2009
Automated Process Approved IPR006162 (IPR006162 Phosphopantetheine attachment site) Jul 2009
Automated Process Approved IPR003231 (IPR003231 Acyl carrier protein (ACP)) Jul 2009
Automated Process Approved IPR006163 (IPR006163 (DEPRECATED) Phosphopantetheine-binding) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006633 fatty acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003231
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000036 acyl carrier activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0031177 phosphopantetheine binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006162
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name acpP Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003703
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1166 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product acyl carrier protein (ACP) Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR009081 Phosphopantetheine binding ACP domain Protein Sequence Similarity - InterPro Domain: IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006162 Phosphopantetheine attachment site Protein Sequence Similarity - InterPro Domain: IPR006162
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003231 Acyl carrier protein (ACP) Protein Sequence Similarity - InterPro Domain: IPR003231
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006163 (DEPRECATED) Phosphopantetheine-binding Protein Sequence Similarity - InterPro Domain: IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0003703 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003703
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006633 fatty acid biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003231
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0048037 (OBSOLETE) cofactor binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006163
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000036 acyl carrier activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009081
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0031177 phosphopantetheine binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR006162
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001843 acpP CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001519 acpP CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0047179 acpP CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002085 acpP CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003720 acpP CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001096 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005380 acpP CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0005269 CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008328 acpP CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077467 acpP CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001260 acpP CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005658 acpP CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010189 acpP CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009220 acpP CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010137 acpP CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0006313 acpP CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010099 acpP CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0011295 acpP CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010852 acpP CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025533 acpP CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009988 acpP_1 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005894 acpP CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0003703 acpP CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001106 acpP CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001185 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002032 acpP CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131419 acpP CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000387 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001223 acpP CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062058 acpP CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001045 acpP CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000457 acpP CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006164 acpP CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001885 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001352 acpP CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006442 acpP CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006040 acpP CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005829 acpP CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008623 acpP CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005674 acpP CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008097 acpP CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004766 acpP CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005664 acpP CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008422 acpP CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001667 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001655 acpP CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002339 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005844 acpP CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008681 acpP CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005354 acpP CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107585 acpP CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083438 acpP CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094138 acpP CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008253 acpP CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008461 acpP CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006292 acpP CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002185 acpP CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007641 acpP CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002369 acpP CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072231 acpP CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087442 acpP CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001185 acpP CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001200 acpP CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001654 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004948 acpP CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001425 acpP_2 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000047 acpP CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000026 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239675 acpP CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007619 acpP CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002330 acpP CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005071 acpP CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001880 acpP CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120624 acpP CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004731 acpP CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005755 acpP CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0008464 acpP CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031451 acpP CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007694 acpP CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002448 acpP CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002218 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007941 acpP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005546 acpP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002557 acpP CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003054 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001981 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1201283 to 1211519
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0004246sraBncRNAforward12012571201425Upstream
AEC-0001040yceDCDSforward12014621201983Upstream
AEC-0001041rpmFCDSforward12020351202208Upstream
AEC-0001042plsXCDSforward12022891203359Upstream
AEC-0001043fabHCDSforward12034271204380Upstream
AEC-0001044fabDCDSforward12043961205325Upstream
AEC-0001045fabGCDSforward12053381206072Upstream
AEC-0001046acpPCDSforward12062831206519Matches
AEC-0001047fabFCDSforward12066071207848Downstream
AEC-0001048pabCCDSforward12079681208777Downstream
AEC-0001049yceGCDSforward12087801209802Downstream
AEC-0001050tmkCDSforward12097921210433Downstream
AEC-0001051holBCDSforward12104301211434Downstream
AEC-0001052ycfHCDSforward12114451212242Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948