Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001053 (ptsG) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001053 showshow history
Names
ptsG ECDH10B_1173
Product
fused glucose-specific PTS enzymes: IIBcomponent; IIC component
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1212537 1213970 1434 478
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001996 (IPR001996 Phosphotransferase system, IIB component, type 1) Jul 2009
Automated Process Approved IPR013013 (IPR013013 Phosphotransferase system, EIIC component, type 1) Jul 2009
Automated Process Approved IPR011299 (IPR011299 PTS system glucose-specific IIBC component) Jul 2009
Automated Process Approved IPR004719 (IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component) Jul 2009
Automated Process Approved IPR011535 (IPR011535 (DEPRECATED) Phosphotransferase system, glucose-like IIB component) Jul 2009
Automated Process Approved IPR003352 (IPR003352 Phosphotransferase system, EIIC) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0015758 (DEPRECATED) glucose transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005355 glucose transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name ptsG Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003722
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1173 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fused glucose-specific PTS enzymes: IIBcomponent; IIC component Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013013 Phosphotransferase system, EIIC component, type 1 Protein Sequence Similarity - InterPro Domain: IPR013013
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001996 Phosphotransferase system, IIB component, type 1 Protein Sequence Similarity - InterPro Domain: IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011299 PTS system glucose-specific IIBC component Protein Sequence Similarity - InterPro Domain: IPR011299
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component Protein Sequence Similarity - InterPro Domain: IPR004719
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003352 Phosphotransferase system, EIIC Protein Sequence Similarity - InterPro Domain: IPR003352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011535 (DEPRECATED) Phosphotransferase system, glucose-like IIB component Protein Sequence Similarity - InterPro Domain: IPR011535
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0003722 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003722
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0015758 (DEPRECATED) glucose transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005355 glucose transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR011299
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001996
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001666 ptsG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001752 ptsG CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017988 ptsG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002078 ptsG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003727 ptsG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009053 ptsG CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001103 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005373 ptsG CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001017 ptsG CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008319 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009625 ptsG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009014 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077476 ptsG CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001267 ptsG CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005665 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006394 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010197 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009227 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009989 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0006320 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010106 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010735 ptsG CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025540 ptsG CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008184 ptsG_1 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005901 ptsG CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0003722 ptsG CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001113 ptsG CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001192 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002025 ptsG CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131426 ptsG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000379 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001231 CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062065 ptsG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001154 ptsG CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000463 ptsG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002368 ptsG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006156 ptsG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001871 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001362 ptsG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006435 ptsG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006015 ptsG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005805 ptsG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008616 ptsG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005681 ptsG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007908 ptsG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008110 ptsG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007434 ptsG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004773 ptsG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005671 ptsG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008429 ptsG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001660 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001648 ptsG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002331 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005851 ptsG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008674 ptsG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005367 ptsG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008273 ptsG CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107604 ptsG CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083431 ptsG CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094157 ptsG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008245 ptsG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008468 ptsG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006284 ptsG CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002178 ptsG CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007634 ptsG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006352 ptsG CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002362 ptsG CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072238 ptsG CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087449 ptsG CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001192 ptsG CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001207 ptsG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001661 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004974 glcA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003340 glcA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000054 ptsG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000033 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239654 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007611 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002320 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005063 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001888 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120648 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004739 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005747 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000620 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0009612 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0008456 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031460 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007686 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002438 ptsG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002208 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007949 ptsG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005553 ptsG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002550 ptsG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003045 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001990 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1207537 to 1218970
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001047fabFCDSforward12066071207848Upstream
AEC-0001048pabCCDSforward12079681208777Upstream
AEC-0001049yceGCDSforward12087801209802Upstream
AEC-0001050tmkCDSforward12097921210433Upstream
AEC-0001051holBCDSforward12104301211434Upstream
AEC-0001052ycfHCDSforward12114451212242Upstream
AEC-0001053ptsGCDSforward12125371213970Matches
AEC-0001054fhuECDScomplement12140301216219Downstream
AEC-0001055hinTCDSforward12165531216912Downstream
AEC-0001056ycfLCDSforward12169151217292Downstream
AEC-0001057ycfMCDSforward12173061217947Downstream
AEC-0001058thiKCDSforward12179281218752Downstream
AEC-0001059nagZCDSforward12187631219788Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948