Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001054 (fhuE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001054 showshow history
Names
fhuE ECDH10B_1174
Product
ferric-rhodotorulic acid outer membrane transporter
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1214030 1216219 2190 730
Sequence

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View sequence with flanking regions: bases upstream and bases downstream

Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR010916 (IPR010916 TonB box, conserved site) Jul 2009
Automated Process Approved IPR010917 (IPR010917 TonB-dependent receptor, conserved site) Jul 2009
Automated Process Approved IPR012910 (IPR012910 TonB-dependent receptor, plug domain) Jul 2009
Automated Process Approved IPR000531 (IPR000531 TonB-dependent receptor-like, beta-barrel) Jul 2009
Automated Process Approved IPR010105 (IPR010105 TonB-dependent siderophore receptor) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0015891 siderophore transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010105
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015343 siderophore transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010105
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005506 iron ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010105
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004872 (DEPRECATED) receptor activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fhuE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003724
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1174 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product ferric-rhodotorulic acid outer membrane transporter Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR010916 TonB box, conserved site Protein Sequence Similarity - InterPro Domain: IPR010916
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010917 TonB-dependent receptor, conserved site Protein Sequence Similarity - InterPro Domain: IPR010917
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012910 TonB-dependent receptor, plug domain Protein Sequence Similarity - InterPro Domain: IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010105 TonB-dependent siderophore receptor Protein Sequence Similarity - InterPro Domain: IPR010105
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR000531 TonB-dependent receptor-like, beta-barrel Protein Sequence Similarity - InterPro Domain: IPR000531
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0003724 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003724
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0015891 siderophore transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010105
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006810 transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004872 (DEPRECATED) receptor activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005215 transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012910
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015343 siderophore transmembrane transporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010105
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005506 iron ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010105
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002262 fhuE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002211 fhuE CDS
Ortholog
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009054 fhuE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001104 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005372 fhuE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001018 fhuE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008317 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009624 fhuE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0009013 FhuE CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077477 fhuE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010758 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010254 fhuE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001268 fhuE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005666 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006395 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010198 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009228 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009990 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009454 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0006321 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009372 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010107 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009698 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010736 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010475 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010238 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010341 fhuE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025541 fhuE CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005902 fhuE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0003724 fhuE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001114 fhuE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001193 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002024 fhuE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131427 fhuE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000378 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001232 fhuE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061171 fhuE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0003153 fhuE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002553 fhuE CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000540 fhuE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006155 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001870 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001363 fhuE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006434 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006009 fhuE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005799 fhuE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008615 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005682 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007909 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008111 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007435 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004774 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005672 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008430 CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002330 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005852 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008673 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005368 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008274 CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094159 fhuE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008244 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008469 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006283 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002177 fhuE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007633 fhuE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006351 fhuE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002361 fhuE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001193 fhuE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001208 fhuE CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237670 ysuR CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007302 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001013 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005665 fhuE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001822 CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120396 ysuR CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005671 fhuE CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004373 fhuE CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000890 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008961 fhuE CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004912 fhuE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032365 ysuR CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007765 fhuE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002935 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001720 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006579 fhuE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006423 fhuE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001621 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001970 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003008 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1209030 to 1221219
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001049yceGCDSforward12087801209802Downstream
AEC-0001050tmkCDSforward12097921210433Downstream
AEC-0001051holBCDSforward12104301211434Downstream
AEC-0001052ycfHCDSforward12114451212242Downstream
AEC-0001053ptsGCDSforward12125371213970Downstream
AEC-0001054fhuECDScomplement12140301216219Matches
AEC-0001055hinTCDSforward12165531216912Upstream
AEC-0001056ycfLCDSforward12169151217292Upstream
AEC-0001057ycfMCDSforward12173061217947Upstream
AEC-0001058thiKCDSforward12179281218752Upstream
AEC-0001059nagZCDSforward12187631219788Upstream
AEC-0001060ycfPCDSforward12198111220353Upstream
AEC-0001061ndhCDSforward12207531222057Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948