Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001070 (nagK) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001070 showshow history
Names
nagK ECDH10B_1191
Product
N-acetyl-D-glucosamine kinase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1233261 1234172 912 304
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000600 (IPR000600 ROK family) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nagK Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003778
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1191 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product N-acetyl-D-glucosamine kinase Experimental - PubMed ID: 15489439
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000600 ROK family Protein Sequence Similarity - InterPro Domain: IPR000600
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0003778 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0003778
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002111 nagK CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002125 nagK CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020053 nagK CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002040 ycfX CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003745 nagK CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009072 nagK CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001123 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005354 nagK CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001035 ycfX CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008294 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009606 nagK CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008996 ycfX CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077498 nagK CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010272 nagK CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001285 nagK CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005684 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006414 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010216 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009246 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010008 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009436 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0006339 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0009354 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010126 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009716 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010754 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010133 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008205 nagK CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010359 nagK CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025558 ycfX CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008205 nagK CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005919 nagK CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0003778 nagK CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001131 ycfX CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001211 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002006 nagK CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131444 CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000359 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001250 ycfX CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062084 CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001166 CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001667 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002386 CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006138 nagK CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001849 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001379 ycfX CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006417 nagK CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005951 ycfX CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005744 ycfX CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008598 nagK CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005699 nagK CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0007927 nagK CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008128 nagK CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007452 nagK CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004791 nagK CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005689 nagK CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0008447 nagK CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001642 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001630 ycfX CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0002310 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0005868 nagK CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005385 nagK CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008291 nagK CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107640 CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083414 CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094210 ycfX CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0008227 nagK CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008486 nagK CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0006267 nagK CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002157 ycfX CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006333 nagK CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002344 ycfX CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072258 ycfX CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087466 ycfX CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001210 ycfX CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001225 ycfX CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0003454 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0005104 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003325 nagK CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000068 nagK CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000054 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0238535 nagK_1 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002296 nagK_1 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001770 nagK_1 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002606 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031483 nagK_1 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002417 nagK_1 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002186 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005570 nagK CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002526 nagK CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003013 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002009 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1228261 to 1239172
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001065mfdCDScomplement12251861228632Upstream
AEC-0001066ycfTCDScomplement12287601229833Upstream
AEC-0001067lolCCDSforward12300951231294Upstream
AEC-0001068lolDCDSforward12312871231988Upstream
AEC-0001069lolECDSforward12319881233232Upstream
AEC-0001070nagKCDSforward12332611234172Matches
AEC-0001071cobBCDSforward12341881235027Downstream
AEC-0001072ycfZCDScomplement12351471235935Downstream
AEC-0001073ymfACDScomplement12359321236393Downstream
AEC-0001074potDCDScomplement12364511237497Downstream
AEC-0001075potCCDScomplement12374941238288Downstream
AEC-0001076potBCDScomplement12382851239112Downstream
AEC-0001077potACDScomplement12391261240262Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948