Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001119 (emtA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001119 showshow history
Names
emtA ECDH10B_1246
Product
lytic murein endotransglycosylase E
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1282644 1283255 612 204
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000189 (IPR000189 Prokaryotic transglycosylase, active site) Jul 2009
Automated Process Approved IPR008258 (IPR008258 Transglycosylase SLT domain 1) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name emtA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004006
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1246 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product lytic murein endotransglycosylase E Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000189 Prokaryotic transglycosylase, active site Protein Sequence Similarity - InterPro Domain: IPR000189
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008258 Transglycosylase SLT domain 1 Protein Sequence Similarity - InterPro Domain: IPR008258
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0004006 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004006
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002145 emtA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001991 emtA CDS
Ortholog
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0002000 mltE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003801 mltE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006055 mltE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001246 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009786 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001138 mltE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008236 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005089 mltE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008946 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077754 emtA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009881 mltE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010563 mltE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001395 emtA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005780 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004059 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0010392 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009427 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009084 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008849 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0006520 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010365 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010310 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008504 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010499 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009937 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009789 mltE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007996 mltE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025744 emtA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005843 emtA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005973 mltE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0004006 emtA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001209 emtA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001268 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001954 mltE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131639 emtA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002433 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001384 mltE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001187 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002102 emtA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0004038 emtA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0003999 emtA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008123 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005437 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001076 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001074 mltE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001430 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0108875 mltE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082792 mltE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0095852 emtA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002085 mltE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006754 mltE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007828 mltE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0001404 mltE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072324 mltE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087523 emtA pseudogene
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001276 mltE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001276 emtA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000690 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0005604 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000856 emtA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000179 emtA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001677 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239609 mltE1 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006744 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002154 CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004930 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001026 CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123403 CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0008284 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007794 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001282 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008911 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006181 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031595 mltE CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008330 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002279 CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000846 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006930 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005673 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002433 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002884 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002137 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1277644 to 1288255
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001115dadACDSforward12770351278333Upstream
AEC-0001116dadXCDSforward12783431279413Upstream
AEC-0000065IS1414.1repeat_regionforward12796521279753Upstream
AEC-0001117cvrACDScomplement12797991281535Upstream
AEC-0001118ldcACDScomplement12816301282544Upstream
AEC-0001119emtACDSforward12826441283255Matches
AEC-0001120ycgRCDScomplement12832571283991Downstream
AEC-0001121ymgECDSforward12841921284446Downstream
AEC-0001122ycgYCDSforward12846241285064Downstream
AEC-0001123treACDScomplement12851431286840Downstream
AEC-0001124dhaMCDScomplement12871601288578Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948