Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001125 (dhaL) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001125 showshow history
Names
dhaL ECDH10B_1252
Product
dihydroxyacetone kinase, C-terminal domain
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1288589 1289221 633 211
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004007 (IPR004007 DhaL domain) Jul 2009
Automated Process Approved IPR012737 (IPR012737 Dihydroxyacetone kinase, subunit L) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006071 glycerol metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004007
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016772 transferase activity, transferring phosphorus-containing groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012737
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004371 glycerone kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004007
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name dhaL Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004026
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1252 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product dihydroxyacetone kinase, C-terminal domain Experimental - PubMed ID: 11350937
Reference: Escherichia coli K-12 WA2127 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004007 DhaL domain Protein Sequence Similarity - InterPro Domain: IPR004007
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012737 Dihydroxyacetone kinase, subunit L Protein Sequence Similarity - InterPro Domain: IPR012737
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0004026 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004026
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006071 glycerol metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004007
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004371 glycerone kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004007
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016772 transferase activity, transferring phosphorus-containing groups GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012737
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002906 dhaL CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002823 dhaL CDS
Ortholog
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006061 dhaL CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001257 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009793 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001149 dhaL CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008230 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005096 dhaL CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008940 DhaL CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077768 dhaL CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009874 dhaL CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010556 dhaL CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001406 dhaL CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005787 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009952 dhaL CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009804 dhaL CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025760 dhaL CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005855 dhaL CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005980 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0004026 dhaL CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001215 dhaL CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001275 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001941 dhaL CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131656 dhaL CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004371 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001396 ycgS CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002076 CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006761 dhaL CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007835 dhaL CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072339 CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087540 CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001288 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000020 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0001642 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003264 dhaL CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002187 dhaL CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003057 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1283589 to 1294221
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001120ycgRCDScomplement12832571283991Downstream
AEC-0001121ymgECDSforward12841921284446Downstream
AEC-0001122ycgYCDSforward12846241285064Downstream
AEC-0001123treACDScomplement12851431286840Downstream
AEC-0001124dhaMCDScomplement12871601288578Downstream
AEC-0001125dhaLCDScomplement12885891289221Matches
AEC-0001126dhaKCDScomplement12892321290302Upstream
AEC-0001127dhaRCDSforward12905301292449Upstream
AEC-0001128ycgVCDScomplement12925491295416Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948