Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001126 (dhaK) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001126 showshow history
Names
dhaK ECDH10B_1253
Product
dihydroxyacetone kinase, N-terminal domain
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1289232 1290302 1071 357
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012736 (IPR012736 Dihydroxyacetone kinase DhaK, subunit 1) Jul 2009
Automated Process Approved IPR004006 (IPR004006 DhaK domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006071 glycerol metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004006
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004371 glycerone kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004006
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name dhaK Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004029
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1253 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product dihydroxyacetone kinase, N-terminal domain Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 Protein Sequence Similarity - InterPro Domain: IPR012736
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004006 DhaK domain Protein Sequence Similarity - InterPro Domain: IPR004006
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0004029 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004029
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006071 glycerol metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004006
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004371 glycerone kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004006
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002516 dhaK CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001980 dhaK CDS
Ortholog
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006062 dhaK CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001258 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009794 dhaK CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001150 dhaK CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008229 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005097 dhaK CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008939 DhaK CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077769 dhaK CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009873 dhaK CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010555 dhaK CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001407 dhaK CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005788 dhaK CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009953 dhaK CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0009805 dhaK CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0025761 dhaK CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005856 dhaK CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0005981 dhaK CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0004029 dhaK CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001216 dhaK CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001276 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001940 dhaK CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131657 dhaK CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004370 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001397 ycgT CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002075 CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006762 dhaK CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007836 dhaK CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072340 CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087541 CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001289 CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000019 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0001640 dhaK CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003263 dhaK CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0002188 dhaK CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003056 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0234962 dAK1_1 CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005055 CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0003351 dhaK CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007139 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0004004 dhaK CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0126610 dhaK CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006459 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005950 CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000616 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005932 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004285 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0030477 dhaK CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007394 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0000905 dhaK CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0003602 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0004783 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0007301 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0000824 dhaK CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0000960 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0004060 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1284232 to 1295302
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001121ymgECDSforward12841921284446Downstream
AEC-0001122ycgYCDSforward12846241285064Downstream
AEC-0001123treACDScomplement12851431286840Downstream
AEC-0001124dhaMCDScomplement12871601288578Downstream
AEC-0001125dhaLCDScomplement12885891289221Downstream
AEC-0001126dhaKCDScomplement12892321290302Matches
AEC-0001127dhaRCDSforward12905301292449Upstream
AEC-0001128ycgVCDScomplement12925491295416Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948