Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001206 (fabI) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001206 showshow history
Names
fabI ECDH10B_1405
Product
enoyl-[acyl-carrier-protein] reductase, NADH-dependent
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1437671 1438459 789 263
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR014358 (IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH)) Jul 2009
Automated Process Approved IPR002198 (IPR002198 (DEPRECATED) Short-chain dehydrogenase/reductase SDR) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR002347 (IPR002347 Short-chain dehydrogenase/reductase SDR) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002198
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002198
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fabI Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004327
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1405 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product enoyl-[acyl-carrier-protein] reductase, NADH-dependent Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) Protein Sequence Similarity - InterPro Domain: IPR014358
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002198 (DEPRECATED) Short-chain dehydrogenase/reductase SDR Protein Sequence Similarity - InterPro Domain: IPR002198
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002347 Short-chain dehydrogenase/reductase SDR Protein Sequence Similarity - InterPro Domain: IPR002347
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0004327 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0004327
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002198
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002198
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002243 fabI CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002179 fabI CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019259 fabI CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004121 fabI CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0006160 fabI CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001354 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009895 fabI CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001281 fabI CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0008122 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005206 fabI CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005245 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0077875 fabI CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0005452 fabI CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006102 fabI CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001580 fabI CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0005934 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0002240 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005304 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0009669 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010561 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0007211 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0006765 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0007740 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0011240 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0007910 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0008795 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0008292 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0007317 fabI CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008707 fabI CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026250 fabI CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005955 fabI CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006077 fabI CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0004327 fabI CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001317 fabI CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001369 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001838 fabI CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0131825 fabI CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0002279 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001567 fabI CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062232 fabI CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001141 fabI CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001709 fabI CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003576 fabI CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005626 fabI CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001317 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001981 fabI CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005904 fabI CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0004376 fabI CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0004321 fabI CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004767 fabI CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006247 fabI CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005188 fabI CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0005245 fabI CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004703 fabI CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005322 fabI CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006188 fabI CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004594 fabI CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001178 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001177 fabI CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001567 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006435 fabI CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005178 fabI CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005912 fabI CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005248 fabI CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0107842 fabI CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083327 fabI CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0095536 fabI CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007644 fabI CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005899 fabI CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007874 fabI CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0001971 fabI CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006928 fabI CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006529 fabI CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0001563 fabI CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072434 fabI CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087630 fabI CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001380 fabI CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002033 fabI CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000939 fabI CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1432671 to 1443459
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001203gmrCDScomplement14321771434162Downstream
AEC-0001204rnbCDScomplement14343981436332Downstream
AEC-0001205yciWCDScomplement14364001437527Downstream
AEC-0001206fabICDScomplement14376711438459Matches
AEC-0001207ycjDCDScomplement14388271439180Upstream
AEC-0001208sapFCDScomplement14392481440054Upstream
AEC-0001209sapDCDScomplement14400561441048Upstream
AEC-0001210sapCCDScomplement14410481441938Upstream
AEC-0001211sapBCDScomplement14419251442890Upstream
AEC-0001212sapACDScomplement14428871444530Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948