Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001505 (pntA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001505 showshow history
Names
pntA ECDH10B_1736
Product
pyridine nucleotide transhydrogenase, alpha subunit
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1765356 1766888 1533 511
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004571 (IPR004571 (DEPRECATED) NAD(P) transhydrogenase, alpha subunit) Jul 2009
Automated Process Approved IPR008142 (IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1) Jul 2009
Automated Process Approved IPR008143 (IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2) Jul 2009
Automated Process Approved IPR016040 (IPR016040 NAD(P)-binding domain) Jul 2009
Automated Process Approved IPR007886 (IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal) Jul 2009
Automated Process Approved IPR007698 (IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008142
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008142
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name pntA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0005354
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1736 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product pyridine nucleotide transhydrogenase, alpha subunit Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 Protein Sequence Similarity - InterPro Domain: IPR008142
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 Protein Sequence Similarity - InterPro Domain: IPR008143
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Protein Sequence Similarity - InterPro Domain: IPR007698
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Protein Sequence Similarity - InterPro Domain: IPR007886
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016040 NAD(P)-binding domain Protein Sequence Similarity - InterPro Domain: IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004571 (DEPRECATED) NAD(P) transhydrogenase, alpha subunit Protein Sequence Similarity - InterPro Domain: IPR004571
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0005354 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0005354
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008142
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR008142
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005488 binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016040
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001424 pntA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001392 pntA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014633 pntA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004148 pntA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005633 pntA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001559 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010169 pntA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001526 pntA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007753 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005439 pntA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006037 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078110 pntA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008800 pntA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008716 pntA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001802 pntA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006247 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0001783 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005692 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010000 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009944 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008689 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007153 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008433 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010956 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009386 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010555 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009256 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0008575 pntA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009702 pntA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026390 pntA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0009607 pntA CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006352 pntA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0005354 pntA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001645 pntA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001753 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001595 pntA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132290 pntA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004276 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001798 pntA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062466 pntA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001403 pntA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000563 pntA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003372 pntA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005869 pntA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001556 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001737 pntA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006132 pntA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005126 pntA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0004960 pntA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0005003 pntA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006010 pntA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004946 pntA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004993 pntA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004457 pntA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005077 pntA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005955 pntA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004832 pntA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001384 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001376 pntA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001847 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006198 pntA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006785 pntA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005666 pntA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004998 pntA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0108282 pntA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083113 pntA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094934 pntA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007888 pntA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005655 pntA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008511 pntA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0001691 pntA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007198 pntA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0004273 pntA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0001788 pntA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072842 pntA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087935 pntA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001725 pntA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001686 pntA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001717 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006099 pntA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000987 pntA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000673 pntA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0000465 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239290 pntA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006409 pntA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001995 pntA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004792 pntA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001155 pntA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0122923 pntA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007066 pntA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0007498 pntA CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0002513 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007963 pntA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005933 pntA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031842 pntA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008152 pntA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002124 pntA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001001 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007071 pntA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005801 pntA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002309 pntA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002738 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002294 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1760356 to 1771888
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001499asrCDSforward17603611760669Downstream
AEC-0001500ydgDCDSforward17609451761766Downstream
AEC-0001501mdtICDScomplement17618051762134Downstream
AEC-0001502mdtJCDScomplement17621211762486Downstream
AEC-0001503tqsACDSforward17628981763932Downstream
AEC-0001504pntBCDScomplement17639571765345Downstream
AEC-0001505pntACDScomplement17653561766888Matches
AEC-0001506ydgHCDSforward17674121768356Upstream
AEC-0001507ydgICDSforward17685421769924Upstream
AEC-0001508folMCDSforward17699611770683Upstream
AEC-0001509ydgCCDScomplement17706801771015Upstream
AEC-0001510rstACDSforward17711351771863Upstream
AEC-0001511rstBCDSforward17718671773168Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948