Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001555 (grxD) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001555 showshow history
Names
grxD ECDH10B_1788
Product
monothiol glutaredoxin
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 1822349 1822696 348 116
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002109 (IPR002109 Glutaredoxin) Jul 2009
Automated Process Approved IPR004480 (IPR004480 Monothiol glutaredoxin-related) Jul 2009
Automated Process Approved IPR012336 (IPR012336 Thioredoxin-like fold) Jul 2009
Automated Process Approved IPR012335 (IPR012335 (DEPRECATED) Thioredoxin fold) Jul 2009
Automated Process Approved IPR014434 (IPR014434 Monothiol glutaredoxin) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0045454 cell redox homeostasis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015035 protein-disulfide reductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name grxD Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0005527
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1788 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product monothiol glutaredoxin Experimental - PubMed ID: 15833738
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR002109 Glutaredoxin Protein Sequence Similarity - InterPro Domain: IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012336 Thioredoxin-like fold Protein Sequence Similarity - InterPro Domain: IPR012336
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014434 Monothiol glutaredoxin Protein Sequence Similarity - InterPro Domain: IPR014434
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004480 Monothiol glutaredoxin-related Protein Sequence Similarity - InterPro Domain: IPR004480
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012335 (DEPRECATED) Thioredoxin fold Protein Sequence Similarity - InterPro Domain: IPR012335
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0005527 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0005527
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0045454 cell redox homeostasis GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0015035 protein-disulfide reductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002109
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000203 grxD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000283 grxD CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0014666 grxD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001864 ydhD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004201 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005685 CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001611 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010223 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001574 ydhO CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007687 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0005491 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005983 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078163 grxD CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008851 CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0008769 CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001855 grxD CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006303 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006145 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005745 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010053 CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010441 CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010445 CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007206 CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008485 CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010901 CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010904 CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010609 CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0010857 CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010489 CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0010822 CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026443 grxD CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008600 grxD CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006407 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0005527 grxD CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001697 grxD CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001806 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001543 CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132344 grxD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004222 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001852 ydhD CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062188 grxD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001013 CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000497 CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0002753 grxD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005915 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001614 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001685 grxD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006179 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005288 ydhD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005116 ydhD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0009028 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005966 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004902 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004411 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005031 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005910 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004879 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001430 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001420 grxD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001899 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006153 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006831 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005616 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0004948 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0108447 grxD CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0083015 grxD CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094812 grxD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007934 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0005608 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008327 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0001635 ydhD CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007259 CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007569 CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002169 ydhD CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072904 grxD CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0255993 grxD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001785 ydhD CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001629 grxD CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000544 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006312 CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000912 grxD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000738 grxD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002053 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239472 grxD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006683 grxD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002089 grxD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004871 grxD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001078 CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123183 grxD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006987 grxD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006729 grxD CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001629 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007882 grxD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006120 grxD CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031655 grxD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008071 grxD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002214 grxD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000906 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006987 grxD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005728 grxD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002381 grxD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002821 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002201 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1817349 to 1827696
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001553rntCDSforward18169421817589Downstream
AEC-0001554lhrCDSforward18176821822298Downstream
AEC-0001555grxDCDScomplement18223491822696Matches
AEC-0001556ydhOCDSforward18230301823845Upstream
AEC-0001557sodBCDSforward18239731824554Upstream
AEC-0001558ydhPCDScomplement18247161825885Upstream
AEC-0001559ydhBCDScomplement18274611828393Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948