Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001574 (pykF) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001574 showshow history
Names
pykF ECDH10B_1810
Product
pyruvate kinase I
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1844293 1845705 1413 471
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR015793 (IPR015793 Pyruvate kinase, barrel) Jul 2009
Automated Process Approved IPR001697 (IPR001697 Pyruvate kinase) Jul 2009
Automated Process Approved IPR015794 (IPR015794 (DEPRECATED) Pyruvate kinase, alpha/beta) Jul 2009
Automated Process Approved IPR015813 (IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily) Jul 2009
Automated Process Approved IPR015795 (IPR015795 Pyruvate kinase, C-terminal) Jul 2009
Automated Process Approved IPR011037 (IPR011037 Pyruvate kinase-like, insert domain superfamily) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006096 glycolytic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015813
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0030955 potassium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004743 pyruvate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name pykF Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0005600
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1810 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product pyruvate kinase I Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001697 Pyruvate kinase Protein Sequence Similarity - InterPro Domain: IPR001697
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015794 (DEPRECATED) Pyruvate kinase, alpha/beta Protein Sequence Similarity - InterPro Domain: IPR015794
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR011037 Pyruvate kinase-like, insert domain superfamily Protein Sequence Similarity - InterPro Domain: IPR011037
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015795 Pyruvate kinase, C-terminal Protein Sequence Similarity - InterPro Domain: IPR015795
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily Protein Sequence Similarity - InterPro Domain: IPR015813
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015793 Pyruvate kinase, barrel Protein Sequence Similarity - InterPro Domain: IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0005600 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0005600
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006096 glycolytic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000287 magnesium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004743 pyruvate kinase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0030955 potassium ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015793
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0003824 catalytic activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR015813
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001790 pykF CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001331 pykF CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0047171 pykF CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001876 CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004225 pykF CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0009476 pykF CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001635 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010247 pyk CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001593 pykF CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007661 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0010753 pykF CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078189 pykF CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0001878 pykF CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006329 pykF CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010077 pykF CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010466 pykF CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0010477 pykF CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007230 pykF CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010597 pykF CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010877 pykF CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026465 pykF CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008575 pykF CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006432 pykF CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0005600 pykF CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001719 pykF CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0001830 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001519 pykF CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132366 pykF CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004196 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0001875 pykF CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062126 pykF CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001116 pykF CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002806 pykF CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003952 pykF CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005967 pykF CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001672 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0001628 pykF CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006233 pykF CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0005442 pykF CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0005262 pykF CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0008173 pykF CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0005875 pykF CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0004848 pykF CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0004889 pykF CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0007863 pykF CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0004978 pykF CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0005858 pykF CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004931 pykF CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001485 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001475 pykF CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001963 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006101 pykF CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006883 pykF CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0005563 pykF CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0008426 pykF CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0108549 pykF CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082960 pykF CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0094662 pykF CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007988 pykF CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0008410 pykF CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0001608 pykF CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007286 pykF CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002198 pykF CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072929 pykF CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088011 pykF CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001809 pykF CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001607 pykF CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000553 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006353 pykF CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000903 pykF CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000749 pykF CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001474 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239510 pykF CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006696 pykF CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002103 pykF CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004883 pykF CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001068 pykF CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123240 pykF CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006975 pykF CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0006741 pykF CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0007870 pykF CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0006132 pykF CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031644 pykF CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008059 pykF CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002228 pykF CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0000892 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006975 pykF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005716 pykF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002393 pykF CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002837 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002184 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1839293 to 1850705
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001569ydhXCDScomplement18389401839608Upstream
AEC-0001570ydhWCDScomplement18396721840319Upstream
AEC-0001571ydhVCDScomplement18403231842425Upstream
AEC-0001572ydhYCDScomplement18424461843072Upstream
AEC-0001573ydhZCDScomplement18435271843736Upstream
AEC-0001574pykFCDSforward18442931845705Matches
AEC-0001575lppCDSforward18460161846252Downstream
AEC-0001576ynhGCDScomplement18463161847320Downstream
AEC-0001577sufECDScomplement18474691847885Downstream
AEC-0001578sufSCDScomplement18478981849118Downstream
AEC-0001579sufDCDScomplement18491151850386Downstream
AEC-0001580sufCCDScomplement18503611851107Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948