Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001713 (manZ) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001713 showshow history
Names
manZ ECDH10B_1957
Product
mannose-specific enzyme IID component of PTS
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 1992481 1993341 861 287
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR004704 (IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004704
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004704
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name manZ Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006058
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1957 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product mannose-specific enzyme IID component of PTS Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component Protein Sequence Similarity - InterPro Domain: IPR004704
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0006058 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006058
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004704
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016021 integral component of membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004704
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002033 manZ CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001797 manZ CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0047122 manZ CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004387 manZ CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001774 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0010404 manZ CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001717 manZ CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007499 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078345 manZ CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010028 manZ CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010332 manZ CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002064 manZ CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006484 manZ CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0006171 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010234 manZ CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008794 manZ CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007388 manZ CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010215 manZ CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008540 manZ CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026613 manZ CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0006640 manZ_1 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006584 manZ CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0006058 manZ CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001866 manZ CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002024 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001368 manZ CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132513 manZ CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0004035 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002024 manZ CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062652 manZ CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001475 manZ CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000628 manZ CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003250 manZ CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005476 manZ CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001151 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002139 manZ CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005756 manZ CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0003940 manZ CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0003906 manZ CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004619 manZ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006394 manZ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005333 manZ CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008509 manZ CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008515 manZ CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005471 manZ CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006336 manZ CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004447 manZ CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0001044 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0001041 manZ CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001392 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006586 manZ CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0008533 manZ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006059 manZ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007133 manZ CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0108936 manZ CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082760 manZ CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0095956 manZ CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007494 manZ CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0006900 manZ CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0007902 manZ CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0001356 manZ CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0007494 manZ CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0007853 manZ CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002268 manZ CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0072597 manZ CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0087736 manZ CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001500 manZ CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001457 manZ CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000619 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0005267 gptB CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0003875 manZ_1 CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000109 manZ CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002127 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0238188 manZ CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001369 manZ CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004221 CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001659 manZ CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0121144 manZ CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0007193 CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008343 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008023 CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0007105 CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032280 manZ CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0006252 CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002845 manZ CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001635 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0008450 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006350 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001706 manZ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002082 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002922 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 1987481 to 1998341
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001709yoaDCDSforward19870221988620Upstream
AEC-0001710yoaECDScomplement19886241990180Upstream
AEC-0001711manXCDSforward19906431991614Upstream
AEC-0001712manYCDSforward19916771992477Upstream
AEC-0001713manZCDSforward19924811993341Matches
AEC-0001714yobDCDSforward19933961993854Downstream
AEC-0001715yebNCDSforward19942831994849Downstream
AEC-0001716rrmACDScomplement19948461995655Downstream
AEC-0001717cspCCDScomplement19958211996030Downstream
AEC-0001718yobFCDScomplement19960431996186Downstream
AEC-0001719yebOCDScomplement19968561997143Downstream
AEC-0001720yobGCDScomplement19972181997361Downstream
AEC-0004077yobHCDSforward19975201997759Downstream
AEC-0001721kdgRCDScomplement19979031998694Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948