Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001752 (znuC) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001752 showshow history
Names
znuC ECDH10B_1999
Product
zinc transporter subunit: ATP-binding component of ABC superfamily
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2031257 2032012 756 252
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003593 (IPR003593 AAA+ ATPase domain) Jul 2009
Automated Process Approved IPR003439 (IPR003439 ABC transporter-like) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name znuC Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006198
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_1999 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product zinc transporter subunit: ATP-binding component of ABC superfamily Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR003593 AAA+ ATPase domain Protein Sequence Similarity - InterPro Domain: IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003439 ABC transporter-like Protein Sequence Similarity - InterPro Domain: IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0006198 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006198
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0017111 nucleoside-triphosphatase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016887 ATPase GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003593
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003439
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000434 znuC CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000550 znuC CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017083 znuC CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001551 znuC CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0004440 znuC CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0008351 znuC CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0001814 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0005277 znuC CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001749 znuC CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007449 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0009430 znuC CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008897 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078391 znuC CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0008424 znuC CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0010024 znuC CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002107 znuC CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006525 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004590 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0005988 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010279 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0009675 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007434 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0010328 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0010674 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009775 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0010261 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007926 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010069 znuC CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008588 znuC CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026653 znuC CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0008144 znuC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006628 znuC CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0006198 znuC CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0001908 znuC CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002065 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001327 znuC CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132552 znuC CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0003992 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002069 znuC CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062749 znuC CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001288 znuC CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000652 znuC CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0003772 znuC CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0005410 znuC CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0001094 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002230 znuC CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0005629 znuC CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0003687 znuC CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0003601 znuC CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004535 znuC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006468 znuC CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005408 znuC CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0008267 znuC CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0008302 znuC CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005585 znuC CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006415 znuC CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0004360 znuC CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000976 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000977 znuC CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0001283 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006654 znuC CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0007639 znuC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006129 znuC CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0007724 znuC CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0109162 znuC CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082699 znuC CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0096124 znuC CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007414 znuC CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0007015 znuC CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008263 znuC CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0001291 znuC CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006350 znuC CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0006639 znuC CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0001294 znuC CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073037 znuC CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088154 znuC CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0001994 yebM CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0001388 znuC CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000610 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0006891 znuC CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0002649 znuC CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0000234 znuC CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001532 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0238866 znuC CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0006531 znuC CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001753 znuC CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0004551 znuC CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001381 znuC CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0122109 znuC CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005488 znuC CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0008763 znuC CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008162 znuC CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005808 znuC CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031964 znuC CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005920 znuC CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0001861 znuC CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001260 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0007689 znuC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005999 znuC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002125 znuC CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0002498 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002532 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2026257 to 2037012
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001748pykACDSforward20262442027686Upstream
AEC-0001749lpxMCDScomplement20278172028788Upstream
AEC-0001750yebACDScomplement20289082030230Upstream
AEC-0001751znuACDScomplement20302462031178Upstream
AEC-0001752znuCCDSforward20312572032012Matches
AEC-0001753znuBCDSforward20320092032794Overlaps Downstream
AEC-0001754ruvBCDScomplement20329412033951Downstream
AEC-0001755ruvACDScomplement20339602034571Downstream
AEC-0001756yebBCDSforward20348462035448Downstream
AEC-0001757ruvCCDScomplement20354502035971Downstream
AEC-0001758yebCCDScomplement20360062036746Downstream
AEC-0001759nudBCDScomplement20367752037227Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948