Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001896 (hisD) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001896 showshow history
Names
hisD ECDH10B_2168
Product
bifunctional histidinal dehydrogenase and histidinol dehydrogenase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2180129 2181433 1305 435
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR012131 (IPR012131 Histidinol dehydrogenase) Jul 2009
Automated Process Approved IPR001692 (IPR001692 Histidinol dehydrogenase, conserved site) Jul 2009
Automated Process Approved IPR016161 (IPR016161 Aldehyde/histidinol dehydrogenase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0000105 histidine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004399 histidinol dehydrogenase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008270 zinc ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name hisD Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006715
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2168 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product bifunctional histidinal dehydrogenase and histidinol dehydrogenase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR012131 Histidinol dehydrogenase Protein Sequence Similarity - InterPro Domain: IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001692 Histidinol dehydrogenase, conserved site Protein Sequence Similarity - InterPro Domain: IPR001692
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016161 Aldehyde/histidinol dehydrogenase Protein Sequence Similarity - InterPro Domain: IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0006715 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006715
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0000105 histidine biosynthetic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004399 histidinol dehydrogenase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008270 zinc ion binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR012131
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR016161
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000249 hisD CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000384 hisD CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0019056 hisD CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001408 hisD CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003527 hisD CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004976 hisD CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002081 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009368 hisD CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001970 hisD CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007266 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008409 hisD CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008026 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078681 hisD CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0010360 hisD CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006379 hisD CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002300 hisD CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006748 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004375 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006353 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010623 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008832 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0009759 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007793 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008145 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0005639 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009453 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009183 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009656 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006841 hisD CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0008981 hisD CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026906 hisD CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0004841 hisD CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006831 hisD CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0006715 hisD CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002075 hisD CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002334 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001039 hisD CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132825 hisD CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001989 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002300 hisD CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062847 hisD CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001482 hisD CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001860 hisD CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0001982 hisD CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006366 hisD CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000844 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002445 hisD CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006677 hisD CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006600 hisD CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0006273 hisD CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004344 hisD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006660 hisD CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005960 hisD CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006406 hisD CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004042 hisD CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005789 hisD CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006614 hisD CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007658 hisD CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000799 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000799 hisD CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000968 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006849 hisD CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006300 hisD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006379 hisD CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005602 hisD CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0109602 hisD CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082514 hisD CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0096641 hisD CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007210 hisD CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004722 hisD CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005348 hisD CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000923 hisD CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006613 hisD CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003758 hisD CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002558 hisD CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073317 hisD CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088368 hisD CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002234 hisD CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002295 hisD CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000450 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0007947 hisD CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000518 hisD CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001367 hisD CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001321 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237682 hisD CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007290 hisD CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001027 hisD CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005677 hisD CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001833 hisD CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120426 hisD CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005683 hisD CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004361 hisD CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001228 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008973 hisD CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004899 hisD CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032353 hisD CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007753 hisD CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002923 hisD CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001709 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006567 hisD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006412 hisD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001633 hisD CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001982 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0002995 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2175129 to 2186433
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001890yeeFCDScomplement21747362176094Upstream
AEC-0001891yeeYCDScomplement21763612177290Upstream
AEC-0001892yeeZCDScomplement21773362178160Upstream
AEC-0004080yoeBCDScomplement21782432178497Upstream
AEC-0001893yefMCDScomplement21784942178745Upstream
AEC-0001894hisLCDSforward21790282179078Upstream
AEC-0001895hisGCDSforward21792242180123Upstream
AEC-0001896hisDCDSforward21801292181433Matches
AEC-0001897hisCCDSforward21814302182500Overlaps Downstream
AEC-0001898hisBCDSforward21825002183567Downstream
AEC-0001899hisHCDSforward21835672184157Downstream
AEC-0001900hisACDSforward21841572184894Downstream
AEC-0001901hisFCDSforward21848762185652Downstream
AEC-0001902hisICDSforward21856462186257Downstream
AEC-0001903cldCDScomplement21863532187333Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948