Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001910 (wbbI) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001910 showshow history
Names
wbbI ECDH10B_2184
Product
conserved protein
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2194097 2195089 993 331
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR016503 (IPR016503 (DEPRECATED) UDP-galactofuranosyltransferase) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name wbbI Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006751
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2184 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product conserved protein Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR016503 (DEPRECATED) UDP-galactofuranosyltransferase Protein Sequence Similarity - InterPro Domain: IPR016503
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0006751 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006751
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0014292 wbbI CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0017919 wbbI CDS
Ortholog
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0006751 wbbI CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002091 wbbI CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2189097 to 2200089
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001905gndCDScomplement21888942190300Downstream
AEC-0004081wbbL_2CDSpcomplement21904282190709Downstream
AEC-0004532wbbLpseudogenecomplement21904282190776(Interval #2) Downstream
AEC-0000035IS5.9repeat_regioncomplement21907812191975Downstream
AEC-0001906insH-7CDScomplement21909272191943Downstream
AEC-0001907wbbL_1CDSpcomplement21919482192421Downstream
AEC-0004532wbbLpseudogenecomplement21919762192421(Interval #1) Downstream
AEC-0001908wbbKCDScomplement21924232193541Downstream
AEC-0001909wbbJCDScomplement21935262194116Overlaps Downstream
AEC-0001910wbbICDScomplement21940972195089Matches
AEC-0001911wbbHCDScomplement21950922196258Upstream
AEC-0001912glfCDScomplement21962582197361Upstream
AEC-0001913rfbXCDScomplement21973692198616Upstream
AEC-0001914rfbCCDScomplement21986132199170Upstream
AEC-0001915rfbACDScomplement21991702200051Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948