Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001921 (wcaK) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001921 showshow history
Names
wcaK ECDH10B_2195
Product
predicted pyruvyl transferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2206156 2207436 1281 427
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR007345 (IPR007345 Polysaccharide pyruvyl transferase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007345
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name wcaK Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006780
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2195 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product predicted pyruvyl transferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR007345 Polysaccharide pyruvyl transferase Protein Sequence Similarity - InterPro Domain: IPR007345
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0006780 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006780
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0016740 transferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR007345
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0002932 wcaK CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0002964 wcaK CDS
Ortholog
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001383 cpsJ CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0004999 wcaK CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002103 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009345 wcaK CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0001990 wcaK CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007238 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0008004 WcaK CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078704 wcaK CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006404 wcaK CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002326 wcaK CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006774 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0004491 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006379 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0010649 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0008858 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008561 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007819 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008119 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0005666 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0009480 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009209 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007368 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006815 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009007 wcaK CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0026934 wcaK CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0004863 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0006780 wcaK CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002102 wcaK CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002359 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0001016 wcaK CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132855 wcaK CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001959 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002324 wcaK CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006395 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002465 wcaK CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006708 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006689 wcaK CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0006360 wcaK CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004313 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006689 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0005989 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006435 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004074 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005821 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006646 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007626 CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000936 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006878 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006329 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006413 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005636 CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0096720 wcaK CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007190 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004697 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005377 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0000950 wcaK CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006588 wcaK CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003735 wcaK CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073345 wcaK CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088393 wcaK CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002256 wcaK CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2201156 to 2212436
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001917rfbBCDScomplement22010082202093Downstream
AEC-0001918galFCDScomplement22024662203359Downstream
AEC-0001919wcaMCDScomplement22035342204928Downstream
AEC-0001920wcaLCDScomplement22049392206159Overlaps Downstream
AEC-0001921wcaKCDScomplement22061562207436Matches
AEC-0001922wzxCCDScomplement22077122209190Upstream
AEC-0001923wcaJCDScomplement22091922210586Upstream
AEC-0001924cpsGCDScomplement22106412212011Upstream
AEC-0001925cpsBCDScomplement22121162213552Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948