Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0001986 (metG) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0001986 showshow history
Names
metG ECDH10B_2267
Product
methionyl-tRNA synthetase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2283330 2285363 2034 678
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002547 (IPR002547 tRNA-binding domain) Jul 2009
Automated Process Approved IPR009080 (IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding) Jul 2009
Automated Process Approved IPR016027 (IPR016027 (DEPRECATED) Nucleic acid-binding, OB-fold-like) Jul 2009
Automated Process Approved IPR014729 (IPR014729 Rossmann-like alpha/beta/alpha sandwich fold) Jul 2009
Automated Process Approved IPR012340 (IPR012340 Nucleic acid-binding, OB-fold) Jul 2009
Automated Process Approved IPR014758 (IPR014758 Methionyl-tRNA synthetase) Jul 2009
Automated Process Approved IPR002304 (IPR002304 (DEPRECATED) Methionyl-tRNA synthetase, class Ia) Jul 2009
Automated Process Approved IPR004495 (IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal) Jul 2009
Automated Process Approved IPR001412 (IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site) Jul 2009
Automated Process Approved IPR015413 (IPR015413 Methionyl/Leucyl tRNA synthetase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006431 methionyl-tRNA aminoacylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014758
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004825 methionine-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014758
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000049 tRNA binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002547
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name metG Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006991
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2267 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product methionyl-tRNA synthetase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR016027 (DEPRECATED) Nucleic acid-binding, OB-fold-like Protein Sequence Similarity - InterPro Domain: IPR016027
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding Protein Sequence Similarity - InterPro Domain: IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Protein Sequence Similarity - InterPro Domain: IPR014729
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012340 Nucleic acid-binding, OB-fold Protein Sequence Similarity - InterPro Domain: IPR012340
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site Protein Sequence Similarity - InterPro Domain: IPR001412
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR015413 Methionyl/Leucyl tRNA synthetase Protein Sequence Similarity - InterPro Domain: IPR015413
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal Protein Sequence Similarity - InterPro Domain: IPR004495
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002304 (DEPRECATED) Methionyl-tRNA synthetase, class Ia Protein Sequence Similarity - InterPro Domain: IPR002304
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR014758 Methionyl-tRNA synthetase Protein Sequence Similarity - InterPro Domain: IPR014758
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002547 tRNA-binding domain Protein Sequence Similarity - InterPro Domain: IPR002547
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0006991 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0006991
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0006412 translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006431 methionyl-tRNA aminoacylation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014758
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO biological process GO:0006418 tRNA aminoacylation for protein translation GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0005737 cytoplasm GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000049 tRNA binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002547
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0000166 nucleotide binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004825 methionine-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR014758
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005524 ATP binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0004812 aminoacyl-tRNA ligase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009080
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000225 metG CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000158 metG CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020479 metG CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001352 metG CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003452 metG CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005070 metG CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002170 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009135 metG CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002068 metG CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007163 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0008535 metG CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005504 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078778 metG CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0007732 metG CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0006513 metG CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002405 metG CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006840 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0005808 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006497 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005023 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0010402 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0008224 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0007937 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0008527 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0005784 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0008320 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0009513 metG CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0007443 metG CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009353 metG CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027008 metG CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0004938 metG CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006923 metG CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0006991 metG CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002177 metG CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002423 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0000928 metG CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0132925 metG CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0001890 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002395 metG CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0061664 metG CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0000836 metG CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000382 metG CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0004145 metG CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006469 metG CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000774 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002538 metG CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006768 metG CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0006849 metG CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0006516 metG CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0004234 metG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006751 metG CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006051 metG CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006506 metG CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004149 metG CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005898 metG CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006707 metG CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007556 metG CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000697 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000697 metG CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000872 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006940 metG CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006388 metG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006472 metG CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005695 metG CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0109835 metG CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082414 metG CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0096884 metG CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007123 metG CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004629 metG CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005439 metG CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0001008 metG CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006253 metG CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0003619 metG CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002515 metG CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073427 metG CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088454 metG CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002328 metG CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002370 metG CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0000430 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0008008 metG CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000541 metG CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0001351 metG CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0001337 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237627 metG CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0007317 metG CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0000995 metG CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005650 metG CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0001807 metG CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0120341 metG CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0005656 metG CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004388 metG CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0008946 metG CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0004927 metG CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032380 metG CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0007780 metG CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002954 metG CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0001739 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006594 metG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006438 metG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001606 metG CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001952 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003027 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2278330 to 2290363
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0001981yehBCDScomplement22774602279940Upstream
AEC-0001982yehCCDScomplement22799562280675Upstream
AEC-0001983yehDCDScomplement22807102281252Upstream
AEC-0001984yehECDScomplement22815452281826Upstream
AEC-0001985mrpCDScomplement22820892283198Upstream
AEC-0001986metGCDSforward22833302285363Matches
AEC-0001987molR_1CDSforward22855042286328Downstream
AEC-0001988molR_2CDSforward22864402288377Downstream
AEC-0001989molR_3CDSforward22883522289299Downstream
AEC-0001990yehICDSforward22893092292941Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948