Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002038 (fruA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002038 showshow history
Names
fruA ECDH10B_2324
Product
fused fructose-specific PTS enzymes: IIBcomponent; IIC components
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2348730 2350421 1692 564
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR013011 (IPR013011 Phosphotransferase system, EIIB component, type 2) Jul 2009
Automated Process Approved IPR013014 (IPR013014 Phosphotransferase system, EIIC component, type 2) Jul 2009
Automated Process Approved IPR003353 (IPR003353 Phosphotransferase system, fructose-specific IIB subunit) Jul 2009
Automated Process Approved IPR006327 (IPR006327 Phosphotransferase system, fructose IIC component) Jul 2009
Automated Process Approved IPR003352 (IPR003352 Phosphotransferase system, EIIC) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013011
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name fruA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007172
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2324 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product fused fructose-specific PTS enzymes: IIBcomponent; IIC components Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR013011 Phosphotransferase system, EIIB component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013011
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003353 Phosphotransferase system, fructose-specific IIB subunit Protein Sequence Similarity - InterPro Domain: IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003352 Phosphotransferase system, EIIC Protein Sequence Similarity - InterPro Domain: IPR003352
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR013014 Phosphotransferase system, EIIC component, type 2 Protein Sequence Similarity - InterPro Domain: IPR013014
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR006327 Phosphotransferase system, fructose IIC component Protein Sequence Similarity - InterPro Domain: IPR006327
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007172 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007172
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO cellular component GO:0016020 membrane GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR003353
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0005351 carbohydrate:proton symporter activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR013011
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000116 fruA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001729 fruA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020028 fruA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001329 fruA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003399 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005123 fruA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002225 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0009171 fruA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002116 fruA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0007100 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006595 fruA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0005451 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078838 fruA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0009785 fruA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005784 fruA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002458 fruA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0006900 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000529 CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005166 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006607 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008143 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005790 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0005926 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0010752 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007212 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0009381 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0010569 fruA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0009257 fruA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027144 fruA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0004999 fruA_1 CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0006977 fruA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007172 fruA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002233 fruA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002475 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002313 fruA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133067 fruA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000226 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002449 fruA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0062996 fruA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001503 fruA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001892 fruA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000109 fruA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006521 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000712 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002593 fruA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006819 CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007039 fruA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0006693 fruA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0007692 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006802 CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006103 CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006557 CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004201 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0005950 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006759 CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007505 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000647 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000647 fruA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000810 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0006990 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0006440 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006522 CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0005745 CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0109982 fruA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082364 fruA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097042 fruA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0007070 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004576 CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0005490 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002392 fruA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0006193 fruA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002667 fruA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073511 fruA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088517 fruA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002407 fruA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002433 fruA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0001235 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004387 fruA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0001250 fruA CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003829 fruA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003338 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0237341 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005637 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0001236 fruA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0005406 fruA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0002084 fruA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0119548 fruA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0006165 fruA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0004628 fruA CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0005287 fruA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005176 fruA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0032626 fruA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0005325 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0003221 fruA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002879 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0006376 fruA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0006667 fruA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0001403 fruA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0001688 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0003279 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2343730 to 2355421
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002033rihBCDScomplement23432562344197Downstream
AEC-0002034yeiLCDSforward23443662345025Downstream
AEC-0002035yeiMCDScomplement23450962346346Downstream
AEC-0002036yeiNCDScomplement23464402347378Downstream
AEC-0002037yeiCCDScomplement23473662348307Downstream
AEC-0002038fruACDScomplement23487302350421Matches
AEC-0002039fruKCDScomplement23504382351376Upstream
AEC-0002040setBCDSforward23528732354054Upstream
AEC-0004046yeiWCDScomplement23540512354305Upstream
AEC-0002041yeiPCDSforward23544602355032Upstream
AEC-0002042yeiQCDSforward23552552356721Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948