Escherichia coli K-12 DH10B
About ASAP Data Release Policy University of Wisconsin—Madison
Home    Overview    Annotations    BLAST    Downloads    Comparative Genomics    Experiments    Strains    Help (this script)    User: guest  / Log On   
Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002143 (nuoM) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002143 showshow history
Names
nuoM ECDH10B_2439
Product
NADH:ubiquinone oxidoreductase, membrane subunit M
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2481299 2482828 1530 510
Sequence

Get full DNA or protein sequence

View sequence with flanking regions: bases upstream and bases downstream

Context

Browse sequence in GaPP

You last hovered over feature (none)
Pre-Run Search Results
Search Database View Results
InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR003918 (IPR003918 NADH:ubiquinone oxidoreductase) Jul 2009
Automated Process Approved IPR001750 (IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit) Jul 2009
Automated Process Approved IPR010227 (IPR010227 NADH-quinone oxidoreductase, chain M/4) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nuoM Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007529
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2439 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product NADH:ubiquinone oxidoreductase, membrane subunit M Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR010227 NADH-quinone oxidoreductase, chain M/4 Protein Sequence Similarity - InterPro Domain: IPR010227
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Protein Sequence Similarity - InterPro Domain: IPR001750
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR003918 NADH:ubiquinone oxidoreductase Protein Sequence Similarity - InterPro Domain: IPR003918
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007529 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007529
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000277 nuoM CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000323 nuoM CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017334 nuoM CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001267 nuoM CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003258 nuoM CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005241 nuoM CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002334 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008945 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002222 nuoM CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006965 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006703 nuoM CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006660 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078955 nuoM CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006554 nuoM CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005893 nuoM CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002564 nuoM CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007004 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000644 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006754 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005279 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006721 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006306 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008256 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005676 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006041 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006974 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007324 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006873 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006202 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007496 nuoM CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027249 nuoM CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005112 nuoM CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007099 nuoM CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007529 nuoM CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002351 nuoM CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002575 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002430 nuoM CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133172 nuoM CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000111 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002564 nuoM CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063302 nuoM CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001738 nuoM CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002949 nuoM CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000259 nuoM CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006625 nuoM CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000610 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002711 nuoM CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006927 nuoM CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007406 nuoM CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007041 nuoM CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006212 nuoM CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006918 nuoM CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006220 nuoM CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006652 nuoM CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004303 nuoM CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006059 nuoM CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006863 nuoM CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007397 nuoM CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000548 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000547 nuoM CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000667 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007108 nuoM CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005075 nuoM CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006622 nuoM CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006597 nuoM CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110262 nuoM CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082259 nuoM CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097396 nuoM CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006965 nuoM CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004470 nuoM CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008713 nuoM CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002556 nuoM CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008062 nuoM CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005945 nuoM CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002845 nuoM CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073629 nuoM CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088614 nuoM CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002513 nuoM CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002555 nuoM CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002159 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004073 nuoM CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000617 nuoM CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003776 nuoM CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002535 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239922 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005919 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002458 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007920 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000923 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123763 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004693 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005591 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0001306 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006911 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005484 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031330 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008216 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002576 nuoM CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002343 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005781 nuoM CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005431 nuoM CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002664 nuoM CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003187 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001847 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2476299 to 2487828
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002137yfbLCDSforward24756472476618Downstream
AEC-0002138yfbMCDSforward24767212477224Downstream
AEC-0002139yfbNCDScomplement24774972478213Downstream
AEC-0002140yfbOCDSforward24783682478844Downstream
AEC-0002141yfbPCDSforward24789002479751Downstream
AEC-0002142nuoNCDScomplement24798352481112Downstream
AEC-0002143nuoMCDScomplement24812992482828Matches
AEC-0002144nuoLCDScomplement24829922484833Upstream
AEC-0002145nuoKCDScomplement24848302485132Upstream
AEC-0002146nuoJCDScomplement24851292485683Upstream
AEC-0002147nuoICDScomplement24856952486237Upstream
AEC-0002148nuoHCDScomplement24862522487229Upstream
AEC-0002149nuoGCDScomplement24872262489958Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948