Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002145 (nuoK) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002145 showshow history
Names
nuoK ECDH10B_2441
Product
NADH:ubiquinone oxidoreductase, membrane subunit K
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2484830 2485132 303 101
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001133 (IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0042773 ATP synthesis coupled electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001133
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016651 oxidoreductase activity, acting on NAD(P)H GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001133
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nuoK Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007534
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2441 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product NADH:ubiquinone oxidoreductase, membrane subunit K Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K Protein Sequence Similarity - InterPro Domain: IPR001133
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007534 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007534
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0042773 ATP synthesis coupled electron transport GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001133
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016651 oxidoreductase activity, acting on NAD(P)H GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR001133
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000538 nuoK CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000674 nuoK CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017331 nuoK CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001265 nuoK CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003256 nuoK CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005243 nuoK CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002336 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008943 nuoK CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002224 nuoK CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006962 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006705 nuoK CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006658 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078957 nuoK CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006556 nuoK CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005895 nuoK CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002566 nuoK CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007006 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000646 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006756 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005281 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006723 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006308 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008258 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005674 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006044 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006976 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007326 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006871 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006204 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007498 nuoK CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027252 nuoK CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005114 nuoK CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007101 nuoK CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007534 nuoK CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002353 nuoK CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002577 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002432 nuoK CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133174 nuoK CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000109 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002566 nuoK CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063304 nuoK CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001737 nuoK CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000761 nuoK CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000261 nuoK CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006627 nuoK CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000608 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002713 nuoK CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006929 nuoK CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007415 nuoK CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007049 nuoK CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006210 nuoK CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006920 nuoK CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006222 nuoK CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006654 nuoK CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004305 nuoK CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006061 nuoK CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006865 nuoK CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007395 nuoK CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000546 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000545 nuoK CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000665 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007110 nuoK CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005072 nuoK CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006624 nuoK CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006599 nuoK CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110267 nuoK CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082257 nuoK CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097401 nuoK CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006963 nuoK CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004468 nuoK CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008715 nuoK CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002558 nuoK CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008064 nuoK CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005947 nuoK CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002847 nuoK CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073632 nuoK CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088616 nuoK CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002515 nuoK CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002557 nuoK CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002157 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004064 nuoK CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000619 nuoK CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003774 nuoK CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002533 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239955 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005921 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002461 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007922 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000921 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123798 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004695 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005593 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006913 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005486 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031328 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008214 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002579 nuoK CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002346 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005779 nuoK CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005429 nuoK CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002666 nuoK CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003190 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001844 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2479830 to 2490132
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002142nuoNCDScomplement24798352481112Downstream
AEC-0002143nuoMCDScomplement24812992482828Downstream
AEC-0002144nuoLCDScomplement24829922484833Overlaps Downstream
AEC-0002145nuoKCDScomplement24848302485132Matches
AEC-0002146nuoJCDScomplement24851292485683Overlaps Upstream
AEC-0002147nuoICDScomplement24856952486237Upstream
AEC-0002148nuoHCDScomplement24862522487229Upstream
AEC-0002149nuoGCDScomplement24872262489958Upstream
AEC-0002150nuoFCDScomplement24900052491342Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948