Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002146 (nuoJ) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002146 showshow history
Names
nuoJ ECDH10B_2442
Product
NADH:ubiquinone oxidoreductase, membrane subunit J
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2485129 2485683 555 185
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001457 (IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nuoJ Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007536
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2442 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product NADH:ubiquinone oxidoreductase, membrane subunit J Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 Protein Sequence Similarity - InterPro Domain: IPR001457
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007536 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007536
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000539 nuoJ CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000627 nuoJ CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017330 nuoJ CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001264 nuoJ CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003255 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005244 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002337 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008942 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002225 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006961 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006706 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006657 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078958 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006557 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005896 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002567 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007007 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000647 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006757 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005282 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006724 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006309 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008259 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005673 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006045 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006977 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007327 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006870 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006205 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007499 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027253 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005115 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007102 nuoJ CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007536 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002354 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002578 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002433 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133175 nuoJ CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000108 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002567 nuoJ CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063305 nuoJ CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0003431 CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0002946 nuoJ CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000262 nuoJ CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006628 nuoJ CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000607 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002714 nuoJ CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006930 nuoJ CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007419 nuoJ CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007052 nuoJ CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006209 nuoJ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006921 nuoJ CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006223 nuoJ CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006655 nuoJ CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004306 nuoJ CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006062 nuoJ CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006866 nuoJ CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007394 nuoJ CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000545 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000544 nuoJ CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000664 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007111 nuoJ CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005071 nuoJ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006625 nuoJ CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006600 nuoJ CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110269 nuoJ CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082256 nuoJ CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097404 nuoJ CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006962 nuoJ CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004467 nuoJ CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008716 nuoJ CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002559 nuoJ CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008065 nuoJ CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005948 nuoJ CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002848 nuoJ CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073633 nuoJ CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088617 nuoJ CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002516 nuoJ CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002558 nuoJ CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002156 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004061 nuoJ CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000620 nuoJ CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003773 nuoJ CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002532 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239959 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005922 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002462 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007923 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000920 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123803 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004696 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005594 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006914 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005487 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031327 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008213 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002580 nuoJ CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002347 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005778 nuoJ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005428 nuoJ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002667 nuoJ CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003191 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001843 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2480129 to 2490683
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002142nuoNCDScomplement24798352481112Downstream
AEC-0002143nuoMCDScomplement24812992482828Downstream
AEC-0002144nuoLCDScomplement24829922484833Downstream
AEC-0002145nuoKCDScomplement24848302485132Overlaps Downstream
AEC-0002146nuoJCDScomplement24851292485683Matches
AEC-0002147nuoICDScomplement24856952486237Upstream
AEC-0002148nuoHCDScomplement24862522487229Upstream
AEC-0002149nuoGCDScomplement24872262489958Upstream
AEC-0002150nuoFCDScomplement24900052491342Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948