Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002147 (nuoI) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002147 showshow history
Names
nuoI ECDH10B_2443
Product
NADH:ubiquinone oxidoreductase, chain I
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2485695 2486237 543 181
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR009051 (IPR009051 Alpha-helical ferredoxin) Jul 2009
Automated Process Approved IPR001450 (IPR001450 (DEPRECATED) 4Fe-4S binding domain) Jul 2009
Automated Process Approved IPR010226 (IPR010226 NADH-quinone oxidoreductase, chain I) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0016651 oxidoreductase activity, acting on NAD(P)H GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009051
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nuoI Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007539
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2443 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product NADH:ubiquinone oxidoreductase, chain I Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001450 (DEPRECATED) 4Fe-4S binding domain Protein Sequence Similarity - InterPro Domain: IPR001450
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR010226 NADH-quinone oxidoreductase, chain I Protein Sequence Similarity - InterPro Domain: IPR010226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR009051 Alpha-helical ferredoxin Protein Sequence Similarity - InterPro Domain: IPR009051
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007539 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007539
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0016651 oxidoreductase activity, acting on NAD(P)H GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR010226
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR009051
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000410 nuoI CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000469 nuoI CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017329 nuoI CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001263 nuoI CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003254 nuoI CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005245 nuoI CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002338 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008941 nuoI CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002226 nuoI CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006960 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006707 nuoI CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006656 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078959 nuoI CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006558 nuoI CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005897 nuoI CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002568 nuoI CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007008 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000648 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006758 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005283 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006725 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006310 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008260 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005672 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006046 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006978 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007328 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006869 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006206 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007500 nuoI CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027254 nuoI CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005116 nuoI CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007103 nuoI CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007539 nuoI CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002355 nuoI CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002579 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002434 nuoI CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133176 nuoI CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000107 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002568 nuoI CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063306 nuoI CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001736 nuoI CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000762 nuoI CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000263 nuoI CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006629 nuoI CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000606 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002715 nuoI CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006931 nuoI CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007422 nuoI CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007055 nuoI CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006208 nuoI CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006922 nuoI CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006224 nuoI CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006656 nuoI CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004307 nuoI CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006063 nuoI CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006867 nuoI CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007393 nuoI CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000544 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000543 nuoI CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000663 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007112 nuoI CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005070 nuoI CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006626 nuoI CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006601 nuoI CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110273 nuoI CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082255 nuoI CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097408 nuoI CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006961 nuoI CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004466 nuoI CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008717 nuoI CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002560 nuoI CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008066 nuoI CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005949 nuoI CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002849 nuoI CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073634 nuoI CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088618 nuoI CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002517 nuoI CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002559 nuoI CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002155 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004056 nuoI CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000621 nuoI CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003772 nuoI CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002531 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239965 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005923 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002463 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007924 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000919 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123805 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004697 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005595 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000580 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006915 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005488 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031326 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008212 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002581 nuoI CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002348 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005777 nuoI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005427 nuoI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002668 nuoI CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003192 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001842 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2480695 to 2491237
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002142nuoNCDScomplement24798352481112Downstream
AEC-0002143nuoMCDScomplement24812992482828Downstream
AEC-0002144nuoLCDScomplement24829922484833Downstream
AEC-0002145nuoKCDScomplement24848302485132Downstream
AEC-0002146nuoJCDScomplement24851292485683Downstream
AEC-0002147nuoICDScomplement24856952486237Matches
AEC-0002148nuoHCDScomplement24862522487229Upstream
AEC-0002149nuoGCDScomplement24872262489958Upstream
AEC-0002150nuoFCDScomplement24900052491342Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948