Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002148 (nuoH) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002148 showshow history
Names
nuoH ECDH10B_2444
Product
NADH:ubiquinone oxidoreductase, membrane subunit H
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2486252 2487229 978 326
Sequence

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Context

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BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR001694 (IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nuoH Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007541
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2444 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product NADH:ubiquinone oxidoreductase, membrane subunit H Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H Protein Sequence Similarity - InterPro Domain: IPR001694
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007541 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007541
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000411 nuoH CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000405 nuoH CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017327 nuoH CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001262 nuoH CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003253 nuoH CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005246 nuoH CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002339 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008940 CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002227 nuoH CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006959 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006708 nuoH CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006655 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078960 nuoH CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006559 nuoH CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005898 nuoH CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002569 nuoH CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007009 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000649 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006759 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005284 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006726 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006311 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008261 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005671 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006047 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006979 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007329 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006868 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006207 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007501 nuoH CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027255 nuoH CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005117 nuoH CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007104 nuoH CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007541 nuoH CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002356 nuoH CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002580 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002435 nuoH CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133177 nuoH CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000106 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002569 nuoH CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063307 nuoH CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001735 nuoH CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000763 nuoH CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000264 nuoH CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006630 nuoH CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000605 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002716 nuoH CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006932 nuoH CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007427 nuoH CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007060 nuoH CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006207 nuoH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006923 nuoH CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006225 nuoH CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006657 nuoH CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004308 nuoH CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006064 nuoH CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006868 nuoH CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007392 nuoH CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000543 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000542 nuoH CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000662 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007113 nuoH CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005069 nuoH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006627 nuoH CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006602 nuoH CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110278 nuoH CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082254 nuoH CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097411 nuoH CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006960 nuoH CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004465 nuoH CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008718 nuoH CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002561 nuoH CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008067 nuoH CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005950 nuoH CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002850 nuoH CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073635 nuoH CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088619 nuoH CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002518 nuoH CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002560 nuoH CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002154 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004051 nuoH CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000622 nuoH CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003771 nuoH CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002530 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239966 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005924 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002464 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007925 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000918 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123810 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004698 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005596 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0000581 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006916 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005489 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031325 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008211 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002582 nuoH CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002349 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005776 nuoH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005426 nuoH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002669 nuoH CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003193 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001841 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2481252 to 2492229
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002143nuoMCDScomplement24812992482828Downstream
AEC-0002144nuoLCDScomplement24829922484833Downstream
AEC-0002145nuoKCDScomplement24848302485132Downstream
AEC-0002146nuoJCDScomplement24851292485683Downstream
AEC-0002147nuoICDScomplement24856952486237Downstream
AEC-0002148nuoHCDScomplement24862522487229Matches
AEC-0002149nuoGCDScomplement24872262489958Overlaps Upstream
AEC-0002150nuoFCDScomplement24900052491342Upstream
AEC-0002151nuoECDScomplement24913392491839Upstream
AEC-0002152nuoCCDScomplement24918422493644Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948