Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002151 (nuoE) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002151 showshow history
Names
nuoE ECDH10B_2447
Product
NADH:ubiquinone oxidoreductase, chain E
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2491339 2491839 501 167
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR002023 (IPR002023 NADH-quinone oxidoreductase subunit E-like) Jul 2009
Automated Process Approved IPR012336 (IPR012336 Thioredoxin-like fold) Jul 2009
Automated Process Approved IPR012335 (IPR012335 (DEPRECATED) Thioredoxin fold) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nuoE Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007547
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2447 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product NADH:ubiquinone oxidoreductase, chain E Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR002023 NADH-quinone oxidoreductase subunit E-like Protein Sequence Similarity - InterPro Domain: IPR002023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012335 (DEPRECATED) Thioredoxin fold Protein Sequence Similarity - InterPro Domain: IPR012335
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR012336 Thioredoxin-like fold Protein Sequence Similarity - InterPro Domain: IPR012336
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007547 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007547
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO molecular function GO:0016491 oxidoreductase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0009055 electron transfer activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0051287 NAD binding GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002023
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0001306 nuoE CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0001224 nuoE CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0017324 nuoE CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001259 nuoE CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003250 nuoE CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005249 nuoE CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002342 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008937 nuoE CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002230 nuoE CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006956 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006711 nuoE CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006652 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078963 nuoE CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006562 nuoE CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005901 nuoE CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002572 nuoE CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007012 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000652 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006762 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005287 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006729 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006314 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008264 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005668 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006050 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006982 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007332 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006865 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006210 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007504 nuoE CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027258 nuoE CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005120 nuoE CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007107 nuoE CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007547 nuoE CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002359 nuoE CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002583 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002438 nuoE CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133180 nuoE CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000103 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002572 nuoE CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063310 nuoE CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001721 nuoE CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000765 nuoE CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000267 nuoE CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006633 nuoE CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000602 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002719 nuoE CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006935 nuoE CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007445 nuoE CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007077 nuoE CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006204 nuoE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006926 nuoE CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006228 nuoE CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006660 nuoE CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004311 nuoE CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006067 nuoE CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006871 nuoE CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007389 nuoE CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000540 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000539 nuoE CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000659 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007116 nuoE CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005066 nuoE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006630 nuoE CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006605 nuoE CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110293 nuoE CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082251 nuoE CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097419 nuoE CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006957 nuoE CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004462 nuoE CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008721 nuoE CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002564 nuoE CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008070 nuoE CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005953 nuoE CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002853 nuoE CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073638 nuoE CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088622 nuoE CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002521 nuoE CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002563 nuoE CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002151 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004038 nuoE CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000625 nuoE CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003768 nuoE CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002527 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239977 nuoE CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002467 nuoE CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000915 nuoE CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123831 nuoE CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031322 nuoE CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002585 nuoE CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002352 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002672 nuoE CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003196 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001838 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2486339 to 2496839
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002148nuoHCDScomplement24862522487229Downstream
AEC-0002149nuoGCDScomplement24872262489958Downstream
AEC-0002150nuoFCDScomplement24900052491342Overlaps Downstream
AEC-0002151nuoECDScomplement24913392491839Matches
AEC-0002152nuoCCDScomplement24918422493644Upstream
AEC-0002153nuoBCDScomplement24937382494400Upstream
AEC-0002154nuoACDScomplement24944162494859Upstream
AEC-0002155lrhACDScomplement24954902496428Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948