Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002154 (nuoA) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002154 showshow history
Names
nuoA ECDH10B_2450
Product
NADH:ubiquinone oxidoreductase, membrane subunit A
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome complement 2494416 2494859 444 148
Sequence

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Context

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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR000440 (IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3) Jul 2009
Protein Domains to toptop
Internal error getting result
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name nuoA Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007553
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2450 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product NADH:ubiquinone oxidoreductase, membrane subunit A Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 Protein Sequence Similarity - InterPro Domain: IPR000440
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007553 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007553
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000462 nuoA CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000732 nuoA CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0046520 nuoA CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001256 nuoA CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003247 nuoA CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005252 nuoA CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002345 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008934 nuoA CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0002233 nuoA CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006953 CDS
Automated Process Uncurated Go view Escherichia coli B171 (EPEC) ADN-0006714 nuoA CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006649 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078966 nuoA CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006565 nuoA CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005904 nuoA CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002575 nuoA CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007015 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000655 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006765 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005290 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006732 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006317 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008267 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005665 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006053 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006985 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007335 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006862 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006213 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007507 nuoA CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027261 nuoA CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005123 ndhC CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007110 nuoA CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007553 nuoA CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002362 nuoA CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002586 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002441 nuoA CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133183 nuoA CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000100 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002575 nuoA CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063313 nuoA CDS
Automated Process Uncurated Go view Pectobacterium brasiliensis 1692 AED-0001729 nuoA CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0000768 nuoA CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000270 nuoA CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006636 nuoA CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000599 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002722 nuoA CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006938 nuoA CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007456 nuoA CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007087 nuoA CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006201 nuoA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006929 nuoA CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006231 nuoA CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006663 nuoA CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004314 nuoA CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006070 nuoA CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006874 nuoA CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007386 nuoA CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000537 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000536 nuoA CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000656 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007119 nuoA CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005063 nuoA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006633 nuoA CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006608 nuoA CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110305 nuoA CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082248 nuoA CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097429 nuoA CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006954 nuoA CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004459 nuoA CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008724 nuoA CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002567 nuoA CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008073 nuoA CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005956 nuoA CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002856 nuoA CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073641 nuoA CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088625 nuoA CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002524 nuoA CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002566 nuoA CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002148 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0004026 nuoA CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000628 ndhC CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003885 nuoA CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0002524 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0239980 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005930 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002470 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007931 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000912 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123841 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004704 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005602 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006922 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005495 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031319 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008205 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002588 nuoA CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002355 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005770 nuoA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005420 nuoA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002675 nuoA CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003199 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001834 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2489416 to 2499859
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002149nuoGCDScomplement24872262489958Downstream
AEC-0002150nuoFCDScomplement24900052491342Downstream
AEC-0002151nuoECDScomplement24913392491839Downstream
AEC-0002152nuoCCDScomplement24918422493644Downstream
AEC-0002153nuoBCDScomplement24937382494400Downstream
AEC-0002154nuoACDScomplement24944162494859Matches
AEC-0002155lrhACDScomplement24954902496428Upstream
AEC-0002156yfbQCDSforward24973482498565Upstream
AEC-0002157yfbRCDSforward24986492499248Upstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948