Escherichia coli K-12 DH10B
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Working With: Genome: Escherichia coli K-12 DH10B Version: 10

AEC-0002162 (pta) - Escherichia coli K-12 DH10B - Feature Annotation

ASAP ID
AEC-0002162 showshow history
Names
pta ECDH10B_2459
Product
phosphate acetyltransferase
Type
CDS
Location
# Contig Strand Left Right Length (b.p.) Length (a.a.)
1 Chromosome forward 2504534 2506678 2145 715
Sequence

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Context

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Pre-Run Search Results
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InterProScan
BLASTP
Protein Families to toptop
Author Approval Family Annotated
Automated Process Approved IPR016475 (IPR016475 Phosphate acetyltransferase, bacteria) Jul 2009
Automated Process Approved IPR010766 (IPR010766 DRTGG) Jul 2009
Automated Process Approved IPR002505 (IPR002505 Phosphate acetyl/butaryl transferase) Jul 2009
Automated Process Approved IPR004614 (IPR004614 Phosphate acetyltransferase) Jul 2009
Protein Domains to toptop
Internal error getting result
Gene Ontology to toptop
Author Approval Type Annotation Evidence Annotated
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016407 acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004614
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Annotations to toptop
Author Approval Type Annotation Evidence Annotated
Nomenclature
Person Approved name pta Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007582
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Person Approved locus tag ECDH10B_2459 Unique Identifier - Origin: Guy Plunkett III, guy@genome.wisc.edu
Reference: Escherichia coli K-12 DH10B 		Feb 2008
Product
Person Approved product phosphate acetyltransferase Published Annotation - PubMed ID: 16397293
Reference: Escherichia coli K-12 		Mar 2007
Protein Family
Automated Process Approved protein family IPR010766 DRTGG Protein Sequence Similarity - InterPro Domain: IPR010766
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR016475 Phosphate acetyltransferase, bacteria Protein Sequence Similarity - InterPro Domain: IPR016475
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR002505 Phosphate acetyl/butaryl transferase Protein Sequence Similarity - InterPro Domain: IPR002505
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved protein family IPR004614 Phosphate acetyltransferase Protein Sequence Similarity - InterPro Domain: IPR004614
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Other
Person Approved comment 100% identical to E. coli K-12 MG1655 feature ABE-0007582 Nucleotide Sequence Similarity - ASAP FeatureID: ABE-0007582
Reference: Escherichia coli K-12 MG1655 		Mar 2007
Gene Ontology
Automated Process Approved GO biological process GO:0008152 metabolic process GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0008415 (DEPRECATED) acyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR002505
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Automated Process Approved GO molecular function GO:0016407 acetyltransferase activity GO Inferred from Electronic Annotation - Database Name:Identifier: INTERPRO:IPR004614
Reference: Escherichia coli K-12 DH10B 		Jul 2009
Comparative to toptop
Author Approval Details Genome Feature Name Type
Member
Automated Process Uncurated Go view OrthoMCL (205 gammaproteobacteria) APP-0000245 pta CDS
Automated Process Uncurated Go view OrthoMCL (307 Enterobacteriaceae) ATM-0000342 pta CDS
Ortholog
Automated Process Uncurated Go view Dickeya dadantii 3937 ABF-0020585 pta CDS
Automated Process Uncurated Go view Erwinia tasmaniensis Et1/99 [T] AFI-0001245 pta CDS
Automated Process Uncurated Go view Escherichia albertii TW07627 AFX-0003237 pta1 CDS
Automated Process Uncurated Go view Escherichia coli 101-1 (EAEC) BAB-0005262 pta CDS
Automated Process Uncurated Go view Escherichia coli 536 (UPEC) AEF-0002354 CDS
Automated Process Uncurated Go view Escherichia coli 53638 (EIEC) ADP-0008923 pta CDS
Automated Process Uncurated Go view Escherichia coli APEC O1 (APEC) AEG-0005330 CDS
Automated Process Uncurated Go view Escherichia coli ATCC 8739 AEM-0006944 CDS
Automated Process Uncurated Go view Escherichia coli B7A (ETEC) ADK-0006638 CDS
Automated Process Uncurated Go view Escherichia coli CFT073 (UPEC) ABR-0078977 pta CDS
Automated Process Uncurated Go view Escherichia coli E110019 (EPEC) ADM-0006576 pta CDS
Automated Process Uncurated Go view Escherichia coli E22 (EPEC) ADL-0005915 pta CDS
Automated Process Uncurated Go view Escherichia coli E2348/69 (EPEC) BCI-0002584 pta CDS
Automated Process Uncurated Go view Escherichia coli E24377A (ETEC) ADO-0007025 CDS
Automated Process Uncurated Go view Escherichia coli EC4024 (EHEC) BBI-0000666 CDS
Automated Process Uncurated Go view Escherichia coli EC4042 (EHEC) BBA-0006775 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4045 (EHEC) BBB-0005300 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4076 (EHEC) BAZ-0006743 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4113 (EHEC) BAY-0006328 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4115 (EHEC) BAS-0008277 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4196 (EHEC) BAX-0005654 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4206 (EHEC) BAW-0006063 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4401 (EHEC) BAV-0006995 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4486 (EHEC) BAU-0007345 pta CDS
Automated Process Uncurated Go view Escherichia coli EC4501 (EHEC) BAT-0006851 pta CDS
Automated Process Uncurated Go view Escherichia coli EC508 (EHEC) BBJ-0006225 pta CDS
Automated Process Uncurated Go view Escherichia coli EC869 (EHEC) BBC-0007517 pta CDS
Automated Process Uncurated Go view Escherichia coli EDL933 (EHEC) ABH-0027270 pta CDS
Automated Process Uncurated Go view Escherichia coli F11 (UPEC) ADQ-0005134 pta CDS
Automated Process Uncurated Go view Escherichia coli HS ADR-0007120 pta1 CDS
Person Uncurated Go view Escherichia coli K-12 MG1655 ABE-0007582 pta CDS
Automated Process Uncurated Go view Escherichia coli K-12 W3110 ADY-0002373 pta CDS
Automated Process Uncurated Go view Escherichia coli SE11 AFS-0002596 CDS
Automated Process Uncurated Go view Escherichia coli SMS-3-5 AFT-0002452 pta CDS
Automated Process Uncurated Go view Escherichia coli Sakai (EHEC) ACA-0133192 pta CDS
Automated Process Uncurated Go view Escherichia coli TW14588 (EHEC) BBK-0000089 CDS
Automated Process Uncurated Go view Escherichia coli UTI89 (UPEC) AEA-0002588 pta CDS
Automated Process Uncurated Go view Pectobacterium atrosepticum SCRI1043 ABL-0063327 pta CDS
Automated Process Uncurated Go view Pectobacterium carotovorum WPP14 ADT-0001944 pta CDS
Automated Process Uncurated Go view Pectobacterium parmentieri WPP163 AFJ-0000280 pta CDS
Automated Process Uncurated Go view Salmonella Agona SL483 BBX-0006648 CDS
Automated Process Uncurated Go view Salmonella Arizonae CDC 346-86 BCD-0000589 CDS
Automated Process Uncurated Go view Salmonella Choleraesuis SC-B67 ADB-0002734 pta CDS
Automated Process Uncurated Go view Salmonella Dublin CT_02021853 BCB-0006951 pta CDS
Automated Process Uncurated Go view Salmonella Enteritidis P125109 BCF-0007491 pta CDS
Automated Process Uncurated Go view Salmonella Gallinarum 287/91 BCG-0007119 pta CDS
Automated Process Uncurated Go view Salmonella Hadar RI_05P066 BBT-0006189 pta CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL476 BBV-0006941 pta CDS
Automated Process Uncurated Go view Salmonella Heidelberg SL486 BBW-0006243 pta CDS
Automated Process Uncurated Go view Salmonella Javiana GA_MM04042433 BCA-0006675 pta CDS
Automated Process Uncurated Go view Salmonella Kentucky CDC 191 BBZ-0004326 CDS
Automated Process Uncurated Go view Salmonella Kentucky CVM29188 BBP-0006082 CDS
Automated Process Uncurated Go view Salmonella Newport SL254 BBQ-0006886 pta CDS
Automated Process Uncurated Go view Salmonella Newport SL317 BBR-0007374 pta CDS
Automated Process Uncurated Go view Salmonella Paratyphi A AKU_12601 BCH-0000527 CDS
Automated Process Uncurated Go view Salmonella Paratyphi A ATCC 9150 ADA-0000526 pta CDS
Automated Process Uncurated Go view Salmonella Paratyphi B SPB7 BCC-0000642 CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA23 BBN-0007131 pta CDS
Automated Process Uncurated Go view Salmonella Saintpaul SARA29 BBM-0005051 pta CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund CVM19633 BBO-0006644 pta CDS
Automated Process Uncurated Go view Salmonella Schwarzengrund SL480 BBY-0006620 pta CDS
Automated Process Uncurated Go view Salmonella Typhi CT18 ABX-0110334 pta CDS
Automated Process Uncurated Go view Salmonella Typhi Ty2 ABS-0082238 pta CDS
Automated Process Uncurated Go view Salmonella Typhimurium LT2 [T] ABU-0097463 pta CDS
Automated Process Uncurated Go view Salmonella Virchow SL491 BBS-0006941 CDS
Automated Process Uncurated Go view Salmonella Weltevreden SL484 BBU-0004447 pta CDS
Automated Process Uncurated Go view Salmonella enterica CVM23701 BBL-0008735 CDS
Automated Process Uncurated Go view Shigella boydii 227 ADV-0002579 pta CDS
Automated Process Uncurated Go view Shigella boydii BS512 ADJ-0008082 pta CDS
Automated Process Uncurated Go view Shigella dysenteriae 1012 BAA-0005967 pta CDS
Automated Process Uncurated Go view Shigella dysenteriae 197 ADU-0002865 pta CDS
Automated Process Uncurated Go view Shigella flexneri 2457T ABQ-0073650 pta CDS
Automated Process Uncurated Go view Shigella flexneri 301 ABT-0088634 pta CDS
Automated Process Uncurated Go view Shigella flexneri 8401 BAG-0002533 pta CDS
Automated Process Uncurated Go view Shigella sonnei 046 ADD-0002575 pta CDS
Automated Process Uncurated Go view Yersinia bercovieri ATCC 43970 [T] AEK-0002901 CDS
Automated Process Uncurated Go view Yersinia enterocolitica 8081 BAH-0003991 pta CDS
Automated Process Uncurated Go view Yersinia frederiksenii ATCC 33641 [T] AEI-0000638 pta CDS
Automated Process Uncurated Go view Yersinia intermedia ATCC 29909 [T] AEH-0003214 pta CDS
Automated Process Uncurated Go view Yersinia mollaretii ATCC 43969 [T] AEJ-0003120 CDS
Automated Process Uncurated Go view Yersinia pestis 91001 (biovar Microtus) ACQ-0240011 pta CDS
Automated Process Uncurated Go view Yersinia pestis Angola (biovar Pestoides) ADI-0005940 pta CDS
Automated Process Uncurated Go view Yersinia pestis Antiqua (biovar Antiqua) BAE-0002480 pta CDS
Automated Process Uncurated Go view Yersinia pestis B42003004 (biovar Antiqua) BAL-0007943 pta CDS
Automated Process Uncurated Go view Yersinia pestis CA88-4125 (biovar Orientalis) BAF-0000900 pta CDS
Automated Process Uncurated Go view Yersinia pestis CO92 (biovar Orientalis) ABY-0123885 pta CDS
Automated Process Uncurated Go view Yersinia pestis E1979001 (biovar Antiqua) BAM-0004716 pta CDS
Automated Process Uncurated Go view Yersinia pestis F1991016 (biovar Orientalis) BAQ-0005613 pta CDS
Automated Process Uncurated Go view Yersinia pestis FV-1 (biovar Orientalis) BAK-0004010 CDS
Automated Process Uncurated Go view Yersinia pestis IP275 (biovar Orientalis) BAC-0006933 pta CDS
Automated Process Uncurated Go view Yersinia pestis K1973002 (biovar Mediaevalis) BAO-0005506 pta CDS
Automated Process Uncurated Go view Yersinia pestis KIM (biovar Mediaevalis) ABI-0031309 pta CDS
Automated Process Uncurated Go view Yersinia pestis MG05-1020 (biovar Orientalis) BAP-0008194 pta CDS
Automated Process Uncurated Go view Yersinia pestis Nepal516 (biovar Antiqua) BAD-0002598 pta CDS
Automated Process Uncurated Go view Yersinia pestis Pestoides F (biovar Pestoides) BAI-0002365 CDS
Automated Process Uncurated Go view Yersinia pestis UG05-0454 (biovar Antiqua) BAN-0005759 pta CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP31758 ADS-0005408 pta CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis IP32953 ACZ-0002686 pta CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis PB1/+ AFV-0003212 CDS
Automated Process Uncurated Go view Yersinia pseudotuberculosis YPIII AFW-0001823 CDS
Context Table to toptop

Listed below are features that lie nearby this feature. Features encoded in multiple intervals may appear more than once in the table. Features that span the origin will have a left endpoint greater than the right endpoint.

Features overlapping the region 2499534 to 2511678
FeatureIDNameFeature TypeStrandLeft EndRight EndRelationship
AEC-0000001sourceforward14686137Contains
AEC-0002158yfbTCDScomplement25012262501876Upstream
AEC-0002159yfbUCDScomplement25018872502381Upstream
AEC-0002160yfbVCDScomplement25024642502919Upstream
AEC-0002161ackACDSforward25032572504459Upstream
AEC-0002162ptaCDSforward25045342506678Matches
AEC-0002163yfcCCDSforward25068682508388Downstream
AEC-0002164yfcDCDScomplement25084212508963Downstream
AEC-0002165yfcECDScomplement25090212509575Downstream
AEC-0002166yfcFCDScomplement25096282510272Downstream
AEC-0002167yfcGCDSforward25104082511055Downstream
AEC-0002168folXCDSforward25111122511474Downstream
AEC-0002169yfcHCDSforward25114952512388Downstream
Release Notes to toptop
submitted to GenBank; assigned accession number CP000948